Gene Plim_1226 details

Gene Information

• Locus tag: Plim_1226
• ID: 9137920
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 1568420
• End bp: 1570459
• Gene Length: 2040 bp
• Protein Length: 679 aa
• Translation table: 11
• GC content: 53%
• Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
• Protein accession: YP_003629259
• Protein GI: 296121481

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.18591
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGAAC AATGGCTGTG GAGTTCACGG GTGCGCCCCG TTGTTGATGG CTCAGGTTCT 
CACTCACAGA ACGTGGTGGA TCGCGCGACT TACTCCGGGC GGTCAACAGG TTCACTTTTC 
AGTAACTCCA GTATTCAACT CCGAACGAGC CTGGCGCTGG CGTTGATGAT TACCCTGATG 
TGCCCGGGCC GCGAAGCTCA AGCACAGGTG ACTGCCAAGC AGATTCTCCA GGCTTACTCG 
CCTCGACAAA AGGATGTCGA TTATGAGGTG CCAACGCCCG CTGATCTGGA AAAATGCCAG 
GTGACTGTCG AACGGCTGGG CAAAGTCTCT GGATACGTGG TGCTGGGTGC TCAGGGCCAG 
TTACTTCGTC GCTTCATGGA TACCAACGGT GATAACAAAG TTGACCAGTG GCGCTACTAC 
AATCACGGAA TTGAGGTCTA CCGCGACGTC GATTCCAACT TCAACGAGAA ACCCGATCAG 
TTTCGTTATG TGAATCTGGG CGGAAGTCGC TGGGGAATCG ATCAGAATGA AGATGGTAAA 
GTCGATTCAT GGAAATCCAT TTCTGCCGCA GAAGTCTCTC GAGAAGCCAT CAAGTCGATG 
ACAACTGGGG ATTTTGGCCT GTTGGAGACG TTGCTGATCA ATGCGGCTGA TTTGCGAACT 
CTGGGAGTTA ACGCCGCACT GCAAAAGAAA ATGCTCGAGA ATGTCAGCCA GCCGGAAGCC 
AAAGTGCGGC AGATTTTCTC CAAGTCCAGA GATTTCACAC CGAAGTCTGT CTGGGTGCGA 
TTTGATGCAT TAATGCCCGG ATCCATTCCT GCGGACGACG GAAAAGCCGA GACCGATCTT 
CAGGTTTACG AAAATGCGAT GTGCATTGTT GATAACGGTG GGGGCAAGAC CGCGCTGATT 
CAGTTAGGGG AACTGGTACG CGTGGGCGAT GCCTGGAAAT TGACTCAGAT CCCTGAACCG 
ATTGGAAGCG ATTCGATTAC CGTCGCAGGT GGTGTGTTGA TGCAGCCACT CTTGGCCAGC 
GCTGAAAGTG CGGCTCCCTC GGTCTCCCCG GAAATGCAGG CTTTGCTGGA TAAGCTACAG 
AAACTGGATG CTTCCTCGGC TTCCCTGGCT GGCACACCGG AAGCCATGGC GAAGTTCAAC 
AATGCTCGCA TTGAACTGCT CCTGCAGATC GTGAATGCCA CCACTTCTGA AGATGACAAA 
GAGCAGTGGA TGCAGCAATT GGCCGATGGT TATGCCGCTG CTATTCAGAC GGGCCAGGGT 
GGAGACAGTC TGGATCGATT AAAGGATATG GAAACGAAGC TCAAAAAAGA TGCAGCAGCT 
TCCCCACTGG TGCCTTATGT CACTTACCGT CGCATGTTGG CCCAGTACAG CGTCGAAATG 
AATACCGCGA ATGAGGCCAA GCGGGCGGAT ATTCAGAAAG CATGGCTGGA AAGCCTCGAA 
GGATTCATTA CGACCTATCC GAACTCAGAA GATGCCAGCG AAGCGATGCT GCAACTGGCG 
ATTACCGAAG AGTTCAATGG CCGTATCAAA GAAGCCGTCG CCTGGTACAG CAAGCTGGCA 
GCGGCACAGC CTCAATCCAT CGCGGGGAAA AGGGCCGCTG GTGCAGTAAC TCGAATTCAA 
CTCAATGGGC AGCCACTGAA GCTTTCGGGA ACTTTGCTTG AGGGTGGGAG TTTCAATGTA 
TCGCAACTGA AAGGGAAGGC AGTTCTGGTG GTCTACTGGG CCACATGGTG CCAGCCTTGT 
GCAGCCGATC TCCCTCAGAT TCGAGCCCTT TACGAACAGT ATCGCGCACA GGGATTTGAA 
ATTGTAGGCG TCTGCCTTGA TGTGGATACG TCACCTCAGG ACGTGAACAA ATTCCGCGTG 
GAAAACAAGA TGCGCTGGCC GCAGATCTAC GAGCGAGGTG GTCTGGAAAG TCCGGCGGCT 
GTCCAACTGG GTGTCATCAC ATTGCCTACG ATGATTCTGA CAGATCGAGC TGGTCGTGTG 
GTGAACCGTG GAGCCACAGT TCAGGATTTG AAGACGACTT TACCCCAGAT CCTGAAGTAA 

 

Protein sequence

MSEQWLWSSR VRPVVDGSGS HSQNVVDRAT YSGRSTGSLF SNSSIQLRTS LALALMITLM 
CPGREAQAQV TAKQILQAYS PRQKDVDYEV PTPADLEKCQ VTVERLGKVS GYVVLGAQGQ 
LLRRFMDTNG DNKVDQWRYY NHGIEVYRDV DSNFNEKPDQ FRYVNLGGSR WGIDQNEDGK 
VDSWKSISAA EVSREAIKSM TTGDFGLLET LLINAADLRT LGVNAALQKK MLENVSQPEA 
KVRQIFSKSR DFTPKSVWVR FDALMPGSIP ADDGKAETDL QVYENAMCIV DNGGGKTALI 
QLGELVRVGD AWKLTQIPEP IGSDSITVAG GVLMQPLLAS AESAAPSVSP EMQALLDKLQ 
KLDASSASLA GTPEAMAKFN NARIELLLQI VNATTSEDDK EQWMQQLADG YAAAIQTGQG 
GDSLDRLKDM ETKLKKDAAA SPLVPYVTYR RMLAQYSVEM NTANEAKRAD IQKAWLESLE 
GFITTYPNSE DASEAMLQLA ITEEFNGRIK EAVAWYSKLA AAQPQSIAGK RAAGAVTRIQ 
LNGQPLKLSG TLLEGGSFNV SQLKGKAVLV VYWATWCQPC AADLPQIRAL YEQYRAQGFE 
IVGVCLDVDT SPQDVNKFRV ENKMRWPQIY ERGGLESPAA VQLGVITLPT MILTDRAGRV 
VNRGATVQDL KTTLPQILK