| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1211 |
|---|
| Symbol | |
|---|
| ID | 9137899 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 1550382 |
|---|
| End bp | 1550978 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | HNH endonuclease |
|---|
| Protein accession | YP_003629245 |
|---|
| Protein GI | 296121467 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.594325 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTTGCCA TGTTGACAAG ACCCACTCTG GTGCTCAATC GAAACTGGCA GCCGGTCGGT
GTCGCTTCGG TCGCACGCTC ATTATCTCTA GTTGCCAGTG GCAGAGCGCG CATTGTTGAC
CCTGCTGATT ATCAACTCTA TACCTGGCAA GACTGGTCGA GACTCATCCC TCAGCAGGAT
AAGCCCTTCG TACAATCGGT CACATTCCGC CTGCGCGTCC CTGAGGTGAT CACATTAACC
GGGTATGATC GAGTTCCCCG CCAAGTGGTG ACATTCAGTC GGCTGAATCT CTACAAACGG
GACCAGTATA CCTGTCAGTA TTGTGACGCA AAACCTGGTT CAGAAGAACT GACGATCGAC
CATGTTCAAC CGCGGTCGCG TGGAGGAACC AGCACCTGGG AGAATTGTGT ACTGGCGTGT
ATTGCCTGTA ACAACAAAAA AGCGAACCGC ACGCCTCAGG AAGCCCATAT GCCCCTGCGG
AAAATGCCAA TTCGCCCCAC ATGGCAGCCA CTCTACTCCC GGCACAATCT GAAGATTCAA
AGCTGGAGAA AGTTCCTGAG TGAAGCCTAC TGGACAGTCG AACTGGATGG TTCGTAA
|
|---|
| Protein sequence | MVAMLTRPTL VLNRNWQPVG VASVARSLSL VASGRARIVD PADYQLYTWQ DWSRLIPQQD
KPFVQSVTFR LRVPEVITLT GYDRVPRQVV TFSRLNLYKR DQYTCQYCDA KPGSEELTID
HVQPRSRGGT STWENCVLAC IACNNKKANR TPQEAHMPLR KMPIRPTWQP LYSRHNLKIQ
SWRKFLSEAY WTVELDGS
|
|---|
| |