| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1207 |
|---|
| Symbol | |
|---|
| ID | 9137895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 1544496 |
|---|
| End bp | 1545803 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | oxidoreductase domain protein |
|---|
| Protein accession | YP_003629241 |
|---|
| Protein GI | 296121463 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.274803 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACA CCCCCGCCAC ACACCCATCA GCACAAGCCA ATCGTCGAGA CTTTTTGAAG
ACCTCTGCCG TCGGGGCCAC TGCCGTGGCA CTGGCTTCAC AAATTGCCAC ACGGGCCTAC
GCCGCTGCTG ACGATACGCT GCGGATTGGA CTGGTCGGCT GTGGTGGCCG TGGAACCGGT
GCGGCAGCAC AGGCCCTTTC GGCTGACAAA AACACCAAGC TGGTCGCTAT GGCAGATGCC
TTTGGCGATA ACATCGAAAA CTCACTGAAA AATCTGCAGT CCAACGACAG CTTTGCAGGT
CGCATTACCG TCGACGACGC CCACAAGTTC ACAGGCTTCG ACGGCTGCAA GAACATGCTG
GCTGCGGGCG TCGATGTCAT CCTTCTCTGT TCGCCACCAC ACTTCCGGCC AGAACATATG
AAGCTGGCTG TTGATGCGGG TGTGCACATG TTTGTCGAAA AACCGATTGC GGTTGATGCC
CCTGGCGTTC GCTCGGTTCT GGAGACTTCA AAGAAGGCGG CCGAAAGAAA CCTGGCTGTT
GTCTCGGGCC TCTGCTGGCG CTATGACTAC GGCATGCGAG CTACGTTCGA GCAGATTCAT
CAGGGAACGA TTGGTGATAT CGTTGCCATG CAGTGCAGTT ACGACACACG CGGTTTATGG
CGTAAACCCC GCAAGCCCGA GTGGAGTGAT ATGGAGTGGC AGGTTCGCAA CTGGCTCTAC
TTCACGTGGC TTTCGGGTGA CCATGGCAAC GAGCAGGCTA TCCACAGTCT CGACAAGATG
GCCTGGGCGA TGAAGGATGT TCCACCAGTG GTTTGTAGTG CCACGGGTGG TCGTCAGGTG
CGTGTCAGCC CCGATTTTGG CAACATCTAC GATCACTTTG CCGCCACTTA CGAGTATGCG
AATGGCGTCA AAATGTTCTT CCGCAGCCGC CAGCAGGATG GCACCCAGGT CGATGTCAGC
GATCACGTTC TGGGAACCAA GGGCCGTGCA GATATCTTCA AGCACCGGAT TGTGGACAAC
GAAGGCAAGG TGATCTGGAA GTACGAAGGC CCGAAGAACA ATATGTATCA AACCGAACAT
GACGAACTCT TCGCTTCGAT TCGCAAGGGA CAGCCGATTA ACAATGGCGA ATACATGTGC
TACAGCACCA TGCTTGCCAT CATGTGCCGC ATGTCGGCCT ATACCGGTCA GAAAATCACC
TGGGAGCAAG CCATGAACAG CCAGGAAGTT CTGGGCCCCA AGGCTTACGA GTGGGGTCCA
CTTCCTGTGG AACCAGTGGC CATGCCCGGC TTGACACAGT TCATCTAG
|
|---|
| Protein sequence | MTDTPATHPS AQANRRDFLK TSAVGATAVA LASQIATRAY AAADDTLRIG LVGCGGRGTG
AAAQALSADK NTKLVAMADA FGDNIENSLK NLQSNDSFAG RITVDDAHKF TGFDGCKNML
AAGVDVILLC SPPHFRPEHM KLAVDAGVHM FVEKPIAVDA PGVRSVLETS KKAAERNLAV
VSGLCWRYDY GMRATFEQIH QGTIGDIVAM QCSYDTRGLW RKPRKPEWSD MEWQVRNWLY
FTWLSGDHGN EQAIHSLDKM AWAMKDVPPV VCSATGGRQV RVSPDFGNIY DHFAATYEYA
NGVKMFFRSR QQDGTQVDVS DHVLGTKGRA DIFKHRIVDN EGKVIWKYEG PKNNMYQTEH
DELFASIRKG QPINNGEYMC YSTMLAIMCR MSAYTGQKIT WEQAMNSQEV LGPKAYEWGP
LPVEPVAMPG LTQFI
|
|---|
| |