| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1203 |
|---|
| Symbol | |
|---|
| ID | 9137891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 1536421 |
|---|
| End bp | 1537362 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | L-lactate dehydrogenase |
|---|
| Protein accession | YP_003629237 |
|---|
| Protein GI | 296121459 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTTG GAATTGTCGG TTGTGGTATG GTCGGTTCCT CGGCTGCATT TGCCATGATC
ATGAGTGGTA TTGGCCGGGA AATTGTTCTG GTCGATCGCA ACACCGCACG AGCCGAAGCG
GAAGCCGACG ATCTTTTTCA TGCCGTCCCT TTTGCCCATA ATCTGCGGGT AAAAGCTGGT
GGATATTCAG ATCTGGCCAA TGCGAGTGTT GTTGTTCTCA CAGCAGGTGT CAGTCAGAAA
CCCGGGGAAA CTCGTCTCGA ACTCCTGGGC CGCAATAAGG CGGTCTTTGA AGAGATTGTT
CCTCAGGTCC TCAAATATGC GCCGGGTGCC ATGATTGTGG TGGCCTCAAA TCCTGTCGAT
GTCATGACAC ACCTCACAGC GAATATCGCC ATGCGTTACG GCATGTCTTC GAGTCGAGTC
ATTGGCTCGG GAACCATGCT GGATACCGCG CGGTTTCGTA CGCTGGTGGG AGAAGCCTTA
CTGGTCGATT CTCACCATGT CCATGCCTAT GTGATTGGTG AGCATGGCGA TTCCGAGGTT
TTAACATGGT CGCTGGCCAC AGTGGCCGGG CTGCACCTCG ATGAATACTG CCATTCGCTG
GGAATCTGTC TGCATGAGCA TCAGAAGCAG ATTATCGATG ACCGGGTGCG TGGTGCCGCG
TATCGCATTA TTCAAGGAAA AGGCTCGACT TACTATGGGA TCGGTTCAGC ACTGGCGCGA
CTGGTGAAAA CCATCCTGAA TGACCATCGA GCCGTGCTGA CAGTCTGTGC GCGCGAAAAG
CTGATTGAAG GTGTCGAGGA CGTCACACTC TCGATGCCCC GGGTTGTGGG AGGTTCTGGC
GTCCAATCGA CGATTCCGTT GCATCTGGCT CCGGAGGAGC ATCAGGGATT GCGAAAAAGC
GCTCTCGTCC TGAAAGAGGC CATCAGTTCG ATTGAAAAGT GA
|
|---|
| Protein sequence | MKVGIVGCGM VGSSAAFAMI MSGIGREIVL VDRNTARAEA EADDLFHAVP FAHNLRVKAG
GYSDLANASV VVLTAGVSQK PGETRLELLG RNKAVFEEIV PQVLKYAPGA MIVVASNPVD
VMTHLTANIA MRYGMSSSRV IGSGTMLDTA RFRTLVGEAL LVDSHHVHAY VIGEHGDSEV
LTWSLATVAG LHLDEYCHSL GICLHEHQKQ IIDDRVRGAA YRIIQGKGST YYGIGSALAR
LVKTILNDHR AVLTVCAREK LIEGVEDVTL SMPRVVGGSG VQSTIPLHLA PEEHQGLRKS
ALVLKEAISS IEK
|
|---|
| |