Gene Plim_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1188 
Symbol 
ID9137876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1521047 
End bp1522015 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content54% 
IMG OID 
Productcation diffusion facilitator family transporter 
Protein accessionYP_003629222 
Protein GI296121444 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0609928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAACAAT TACCCGAAGT GCATCCTGAG GCATCAAAAC CAACGTCGAA TACCTTTCGG 
CAGTTGAGAT ATCGAGATGC GCTCTTTGGA GCCTGGCTGG GCCTGTGGAT CAATCTGGCT
TTAGGAATCA TCAAGTTGAT CGCCGGGATT ATCGGTCAAT CCTTTGCGCT GCTGGCCGAT
GCCTTCAATT CATTGAGTGA CTGTGTCACT TCGTCGGCGG TGATCTTCGC ACTCAACTAT
TCGCAAAGGC CTGCCAACTC AAACCATCCC TATGGTTTCT CGAAAGCCGA GGCTCTCGCG
GGCTCGCATG TCGCTCTGGC AATTCTCATT TCGTGCTTTC TTCTCGGATG GGAAGCGATC
GAAAGGCTCA CAGTCCAGCA CGGTTTGCCA CCGTGGTGGA CATTGGCGGT GGCGGCAGCG
AATGCGGTCA TTAAAGAGTC GCTTTACTGG TACAAATTGA AGATTGCCAA AAGCACTGGC
AGCACCGCAT TGCTCGCCCA TGCCTGGGAT CACCGCAACG ATGCTCTCTG TTCTGTGGCC
GTACTCATTG GCCTGAGTGT CGTGCGCATC GGCGGCGAGG CCTGGCGATC AGCAGATGAG
GTCGCTTCGC TCGTGGTGGT ATGTGTGGTC GGTTTTTCCG CAGCCAGCAT CTTTCGGCAA
AGTCTTCGCG AGATGCTGGA TCTGCAAATC GATGAAACTG AAGTGGATGC CATGCGCGCC
ACTGTCCAGA AAGTTCCCGG AGTGCAGGGC ATTGAAAAGT TTCGCGTTCG GAAATCAGGG
ATTGAACAGA TTGCCGAACT GCACTTGCGG CTCCCTGCGG AAATCACCGT TTTCGCAGGA
CATGCTCTCG CTCATCAGGT GAAAGCCGAA CTGATGCAGC AGCATCCCAT GCTGAGAGAT
GTGATCATTC ACGTCGAACC GGCAAGCGAA CCAGCCAGCC ACAGTTCGCC GGAAGAATCA
GCAAGATGA
 
Protein sequence
MEQLPEVHPE ASKPTSNTFR QLRYRDALFG AWLGLWINLA LGIIKLIAGI IGQSFALLAD 
AFNSLSDCVT SSAVIFALNY SQRPANSNHP YGFSKAEALA GSHVALAILI SCFLLGWEAI
ERLTVQHGLP PWWTLAVAAA NAVIKESLYW YKLKIAKSTG STALLAHAWD HRNDALCSVA
VLIGLSVVRI GGEAWRSADE VASLVVVCVV GFSAASIFRQ SLREMLDLQI DETEVDAMRA
TVQKVPGVQG IEKFRVRKSG IEQIAELHLR LPAEITVFAG HALAHQVKAE LMQQHPMLRD
VIIHVEPASE PASHSSPEES AR