Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1185 |
Symbol | |
ID | 9137873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 1517044 |
End bp | 1517991 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | tyrosine recombinase XerD |
Protein accession | YP_003629219 |
Protein GI | 296121441 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0531401 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCACCAC GCTTCAAGCC AGTGCAGAAT TCGGTCGCCA GTGCTCTACC AACGGCCTTG CCATCGACTC ATGTCGAAGG GTTTGTGGCC TATCTTCAGG GGGAGTGCGG GCTCGCGCGG AACACGGTCA TTTCCTACGA GCGCGATATC AAAAGATTCA GCGACTGGTT CCATGAATCC GGTGTGGTGC GTGTGACAGA CATCACGCTA CAGGATCTCT CGGGTTACTT GAGATATCTG CACGAGTTGA AACTGGCGAC CAGCACAATT GCCAGGCATC TGGTTTCGCT GAAGATGTTC TTTCGGTATC TCATGCTGGA AGGGATTCTC AAAGAGAGTG TCGCCGATCT GCTGAACTCT CCCAAGCTTT GGGAGCATTT GCCAAAGGTG CTTTCAGAAG ATGCGGTTAA TCGTCTTCTC GATGCCCCGA TGCATCAGGA TTTGAATCCT TATCGCGACC GTGCTTTGCT GGCGGTGTTG TATGCGACGG GTTGCCGGGC CAGTGAAGTC TGCAGTCTGA AAATGCGCGA TCTGCAACTT GACGAAGGCT TTTGCCGCTG TGTGGGCAAA GGGAATAAGG AGCGTCTAGT CTCTTTGAAT CCAGTCGCAG TCTCAGCACT GAAGACCTAT CTGGCCAGAG AGCGCCCCGC TCGCGCGGGA ACGAACCTCG ACAGTCCGGT GTTTACCTCG AGATCTGGTC GATCCATCGA CCGCATTCAG GTCTGGAAAC TCGTCAAGAG GTATGCCTCA CGGATTGGAT TAAGCGATGC GGTCACGCCG CATACTTTGA GGCACAGTTT TGCCACCCAT ATGCTGGCCA ATGGAGCCGA AATTCGTGCA CTGCAGGAAC TGCTGGGGCA TGCCAGTATT CGCACAACTC AGATCTACAC CCATGTCGAA CATTCCCGGC TCAAGGCCAT CCACAAACAA TGCCACCCCC GCGGGTAA
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Protein sequence | MPPRFKPVQN SVASALPTAL PSTHVEGFVA YLQGECGLAR NTVISYERDI KRFSDWFHES GVVRVTDITL QDLSGYLRYL HELKLATSTI ARHLVSLKMF FRYLMLEGIL KESVADLLNS PKLWEHLPKV LSEDAVNRLL DAPMHQDLNP YRDRALLAVL YATGCRASEV CSLKMRDLQL DEGFCRCVGK GNKERLVSLN PVAVSALKTY LARERPARAG TNLDSPVFTS RSGRSIDRIQ VWKLVKRYAS RIGLSDAVTP HTLRHSFATH MLANGAEIRA LQELLGHASI RTTQIYTHVE HSRLKAIHKQ CHPRG
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