Gene Plim_1184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1184 
Symbol 
ID9137872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp1516080 
End bp1516664 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content57% 
IMG OID 
ProductRhodanese domain protein 
Protein accessionYP_003629218 
Protein GI296121440 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.111986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATCC CCACCATCCT GCCCATCGAA CTGAAAACCC GCCTTGATGC TGCAGAACCA 
GTGACCATTA TTGACGTTCG CACGCCCCTG GAATTTCAGG AAGTGCATGC TGAAGGTGCA 
GTCAACATTC CTTTGGATGA GCTCGAAGCG GAGAAGCTTT CCCGTTTTGT GAATCCTGAG 
AGCAAGACGG TCTACCTGAT CTGCCGTTCT GGAGGTCGAG GCAAGAAAGC CTGCGAAAAA 
CTCTTGGCCA CAGGCCCTTG GCAGCCCATC AATATCGAGG GGGGAACTCA GGCCTGGGAG 
GCAGCCGGCC TGCCGGTTCA TCGTGGCAAA AAAGTCATGT CGCTGGAGCG ACAGGTTCGC 
ATCGCGGCTG GTTCGCTGGT CGTTCTGGGC TGTGCCCTGG GAGCTTTTGT CACTCCTTAC 
GCCTTCGGAC TGGCTGCCTT TGTCGGAGCC GGTCTGGTCT TTGCCGGTGT GACCGATACC 
TGCGCCATGG GATTACTCAT CGCTCGCATG CCCTGGAATT CGACTCCCCG CTCGACGCCC 
TCATGCAGTT TGAATCCCAC GAGCCCACCG GTCACCTCTC ATTAA
 
Protein sequence
MTIPTILPIE LKTRLDAAEP VTIIDVRTPL EFQEVHAEGA VNIPLDELEA EKLSRFVNPE 
SKTVYLICRS GGRGKKACEK LLATGPWQPI NIEGGTQAWE AAGLPVHRGK KVMSLERQVR 
IAAGSLVVLG CALGAFVTPY AFGLAAFVGA GLVFAGVTDT CAMGLLIARM PWNSTPRSTP 
SCSLNPTSPP VTSH