Gene Plim_1180 details

Gene Information

• Locus tag: Plim_1180
• ID: 9137868
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 1510229
• End bp: 1512352
• Gene Length: 2124 bp
• Protein Length: 707 aa
• Translation table: 11
• GC content: 55%
• Product: protein of unknown function DUF255
• Protein accession: YP_003629214
• Protein GI: 296121436

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCTTG TGAATCGCCT TGCGGCAGAG ACCAGCCTGT ATCTCAATCA GCATGCTCAG 
AATCCGGTCG CCTGGCAGCC GTGGGATGAT GAAGCCTGGA GACTTGCGCG CGAGCTCGAT 
CGACCAGTCT TTCTGTCGAT TGGGTACAGT GCCTGCCACT GGTGTCATGT GATGGAGCAC 
GAAAGCTTTG AGAATCCACG CATTGCCGAA CTGCTCAATC AGTGGTTTGT GAGTATCAAG 
GTGGATCGCG AAGAGCGGCC AGACCTCGAT CAGATCTATA TGGCAGCCGT GATTGCCATG 
ACTCAGCAGG GTGGCTGGCC AATGTCGGTC TTTCTCACAC CCCAGGGACA TCCGTTTTAC 
GGAGGAACCT ATTTTCCGCC GACCAGCCGA TACGGACGAC CGGGATTCGC TGAAGTCCTC 
GCCGCCATTC ACGACGCCTG GGAGAACCGT CGTGAAGTGG TGACTGAGCA GGCCTCTCAA 
TTAACCATGA CTGTCCACGA TCAACTTTCT GAACGACAGG AACCAACGAC TCTCCATGAG 
AATCTGCTGG AGAAGGCTGG CCGCACGCTG GTGCGAGTTT GTGATCGTGT GAATGGTGGT 
TTTGGACATG CCCCCAAGTT TCCTCATGCG ATGGATTTAC GGCTCGCCAT GCGCCTCGCG 
CATCGATTCG ATACGACGGA AACAGCCGAA GTGGCTGAGT TGGGGCTGAC GGCCATGGCC 
AAAGGCGGGA TTCATGACCA CCTGGGAGGC GGCTTCGCCC GCTACTCGAC AGACGAAATC 
TGGCTGGTGC CGCACTTCGA AAAAATGCTG TATGACAACG CGTTGTTGCT GCAGGCTTAT 
CTCGATGGCT GGCAGTTTAA CAAGACTGAT TTTTATCGCC GGACGGCCCA GTCGATCGTG 
CATTATGTAT TACGGGAAAT GCAGGTTCCC AGAGCCGAAC TACCTGGTGG ATTCTGTGCG 
GCCCAGGATG CTGACAGCGA GGGTGAAGAG GGGCGATTTT TCGTCTGGTC ACAGTCCGAA 
ATTCGCGATG TCCTCTCAGG AAGTGAACTG GGGAATGACG ATTCGAGGCT TTTTGAGCGG 
GCCTACGGTG TGACCTCGGG AGGGAACTGG GAAGGTCATA ACATTTTGAA TTTGCCGAAG 
ACGATCGCCG CACTCGGACG CGAACTCGGC ATGGCGGAAA CTGCCCTCGA GCAAAAGCTT 
TCTCTGCTGA GGACGAAGTT GTTTGAGCAC AGAAAGAACC GGATTGCCCC AGGTCGTGAT 
GAAAAATTGA TCGTCGCCTG GAATGGTTTG ATGATTTCTG CACTGGCCCG TGCCGGACTG 
GTGCTCGATG ATCAAGAGGC ACTTCAGGCC GCTCAACGGG CCGCCCGCGT GATTCTCGAC 
ATGGCGGAGA GCCTGCCGTA TGGCTTGCCT CATTCGATTC AAAAGGGGCA GCCCAAGCAT 
GGTGCCTATC TGGATGATTA TGGATGCTTT TTGGAAGCAC TGATCGAATT GTTCCTGGCG 
GATGGTGATC CCTCCTGGTT ATCACGGGCT GTTCCACTGA TCGACCGCCT GGTGAATGAG 
TTTCATGATG ATGAACAGGG CGGTTTTTAC TTTACGAGCA GTCAAGCCGA GAAACTGATC 
AGTCGCAGTC GAGATTTTCA GGATAACGTG ACACCCTCTG GCAATGCGGC TGTGGCCAAT 
GCACTGCTGA AGTTCGGTCG AATCACGGGA GACGCCCGCA GTGAAGAGTT GGCACATGAA 
GTTCTTCAGG CTGCCTCGGG CCTGATGCAG CAATCCACAA TGGCCACAGC CCACTCGCTG 
GCCGCTCTCG ATTGGTGGCT GGGTCCCAGT TACGAATGTG TGTATGTACC CGCTGAGACG 
ACATCAACAA CGGATTCTGA GCCTTTGAAA CAGGATGCGG TTCAGCGAGT GGCTCATGAG 
CTGTACCTGC CGAACGTCCT GTTTCTCACA GGAAGAGCGC AATGGGAGGG GACACTGGCA 
GCCGGGCTGG TGCAGGGGCG CCTGGCTCCT GCCAGTGAAC CGGTGCTCTA TGTCTGTCAA 
AAGGGAGTCT GCCAGCTCCC CGTGGTCGGG GAAGCAGCAA TCATCGCCCG ACTCAAAGGG 
CTGGCACAAA GCATAGATGA GTAA 

 

Protein sequence

MNLVNRLAAE TSLYLNQHAQ NPVAWQPWDD EAWRLARELD RPVFLSIGYS ACHWCHVMEH 
ESFENPRIAE LLNQWFVSIK VDREERPDLD QIYMAAVIAM TQQGGWPMSV FLTPQGHPFY 
GGTYFPPTSR YGRPGFAEVL AAIHDAWENR REVVTEQASQ LTMTVHDQLS ERQEPTTLHE 
NLLEKAGRTL VRVCDRVNGG FGHAPKFPHA MDLRLAMRLA HRFDTTETAE VAELGLTAMA 
KGGIHDHLGG GFARYSTDEI WLVPHFEKML YDNALLLQAY LDGWQFNKTD FYRRTAQSIV 
HYVLREMQVP RAELPGGFCA AQDADSEGEE GRFFVWSQSE IRDVLSGSEL GNDDSRLFER 
AYGVTSGGNW EGHNILNLPK TIAALGRELG MAETALEQKL SLLRTKLFEH RKNRIAPGRD 
EKLIVAWNGL MISALARAGL VLDDQEALQA AQRAARVILD MAESLPYGLP HSIQKGQPKH 
GAYLDDYGCF LEALIELFLA DGDPSWLSRA VPLIDRLVNE FHDDEQGGFY FTSSQAEKLI 
SRSRDFQDNV TPSGNAAVAN ALLKFGRITG DARSEELAHE VLQAASGLMQ QSTMATAHSL 
AALDWWLGPS YECVYVPAET TSTTDSEPLK QDAVQRVAHE LYLPNVLFLT GRAQWEGTLA 
AGLVQGRLAP ASEPVLYVCQ KGVCQLPVVG EAAIIARLKG LAQSIDE