| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1148 |
|---|
| Symbol | |
|---|
| ID | 9137836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 1458337 |
|---|
| End bp | 1459722 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | type I phosphodiesterase/nucleotide pyrophosphatase |
|---|
| Protein accession | YP_003629182 |
|---|
| Protein GI | 296121404 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCAGC CGCTGGTGAT CATCAATGTG GTGGGTCTGA CATACGAACA TCTGGGTCAG
CACACGCCAC ACCTTACGGC ACTTGCCAAA GCCGGTACAG CAGCGCCCGC CAGCGGAGTT
TTTCCGGCAG TCACCTGCAC GGCACAGGCC TCGATGCTCA CAGGTACAAC TGCGACGCAG
CATGGGATTG TGGCCAATGG ATGGTACTTT CGCGACACCA GTGAAGTGCG CCTCTGGCTG
CAATCCAATC GATTGATACA AGGGACAAAA CTTTACGAGC AGTTGACATC GATTGATCCG
GGCCTGACCA CCGCCAAAAT GTTCTGGTGG TACAACATGT ATGCACCAGT CGCGTTCTCG
ATGACTCCCC GGCCCAGCTA CCCGGCCGAT GGTCGTAAAA TCTTCGATTC CTATTCGCAT
CCCACGGAAC TGCGCGATGT TCTCCAGAGC AAACTGGGGG TCTTCCCTTT GCAATCCTTC
TGGGGGCCAA TGGCGGGAAT CGAAAGTTCC CGCTGGATTG CCACAGCCTC CATCGAAGTG
ATGAAGAGTT ATCGACCGTC ACTGACATTG GTTTATCTGC CCCATCTGGA TTACGACCTC
CAGCGATATG GCCCGCACGA TCCTCGCATT CAGAAAGCTT TGCAAGAAGT CGACCTCGAA
GCGGGACGTG TCATCGAGGC TGCCCGAGAA TCTGGTGCCG AAATTCTGGT TGTCTCGGAG
TACGGGATTA CGGAAGTGTC AAAACCTGTG CACATCAATC GTGTGCTCCG AGAGGCTGGC
CTGCTGGTCG CTCGCCGCGA GCCATTAGGA TATGAAACCC TCGATTGTGG CGCTTCGCAG
GCATTTGCTG TCAGTGATCA TCAGGTGGCC CATGTCTACG TTCGAGACGC GTCGGATATC
CCGAGAGTCA AAAAACTTCT GGAGCAGACT GAAGGCATTG AGCGCGTGTT AGACGAAGCG
GGTAAAGTCG AGTTGGGAAT CGCCCACGAA CGCTCTGGCG AACTGGTGGC GATTGCCGCA
CCACAGGCGT GGTTCACGTA CTATTTCTGG CTCGATGATC ATCTGGCACC GGATTATGCC
CGCACGATCG ACATCCATCG TAAACCTGGT TACGACCCCA CAGAACTGCT GCTCGATCCG
CAACTAAAGT TCCCGAAGCT GCGCATCATC CGGCGTCTGC TCCAGAAAAA ACTGGGCTTT
CGTTACTACA TGGACGTGAT CGGACTGGAT GCCTCCATCG TTAAGGGTTC GCATGGAAGG
CTCGCGACGA AAGGCCGCGA ACCCGCGGAA GGGCCGGTCA TGATTGCTTC CAGACCAGAC
ATTCGCTCTG AGAACTGGAG TCTGCTCGAT GTCCCTCAAA TTGCCCGAGC CTTGATGGGC
TTGTAA
|
|---|
| Protein sequence | MPQPLVIINV VGLTYEHLGQ HTPHLTALAK AGTAAPASGV FPAVTCTAQA SMLTGTTATQ
HGIVANGWYF RDTSEVRLWL QSNRLIQGTK LYEQLTSIDP GLTTAKMFWW YNMYAPVAFS
MTPRPSYPAD GRKIFDSYSH PTELRDVLQS KLGVFPLQSF WGPMAGIESS RWIATASIEV
MKSYRPSLTL VYLPHLDYDL QRYGPHDPRI QKALQEVDLE AGRVIEAARE SGAEILVVSE
YGITEVSKPV HINRVLREAG LLVARREPLG YETLDCGASQ AFAVSDHQVA HVYVRDASDI
PRVKKLLEQT EGIERVLDEA GKVELGIAHE RSGELVAIAA PQAWFTYYFW LDDHLAPDYA
RTIDIHRKPG YDPTELLLDP QLKFPKLRII RRLLQKKLGF RYYMDVIGLD ASIVKGSHGR
LATKGREPAE GPVMIASRPD IRSENWSLLD VPQIARALMG L
|
|---|
| |