Gene Plim_1131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1131 
Symbol 
ID9137818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1436064 
End bp1437167 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content55% 
IMG OID 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_003629165 
Protein GI296121387 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTTCT GGCTGTTGAA CATGTACGCC GACGAGATCT CACGCTGGCA GAGCACCTCG 
CCTGGCGAGA CTCGCGTCTA TTTAACGGCT CGAACGGCTC TCGCCACGTT TTCTTCGTTC
CTGGTGGCAA TCTTTTACGG CCCATTTGCC ATCCGCTGGC TGAAGTCGAA CTTTCAGGAG
CGTATCGATA GTGCCTCCGC ACGATTGAAC GAGTTGCATT CCTCGAAAAA GTCGACACCA
ACGATGGGGG GGCTCTTTAT CGTCGTGGCA ATCGTTGTGG CGGCCCTGTT GTGTGGCGAC
CTCAGCAATC GATACCTTCA GTTGGCATTG TTAACTGTCG TGCTGTTCGG TGCGATTGGT
GCTATTGATG ACTGGGTCAA GAACCGTACC TCGCGGCGCG GTCTGACGGC TCGTCAAAAA
TTCGCCGCCC AATGCATCGC CAGCATGCTG GTGCTGTTTC CACTCTACTG GAATTTACGA
GCCGCACCGC AACTTGAAGA TCTGCCACTG AATCTGGGGT TGGCAACCAT CAGTCTGGGC
CCTGCGTTTG TGTTGTGGGG CAGCTTCGTC ATGGTCGGCA GTTCCAATGG AGTGAATCTG
ACGGATGGAC TCGATGGACT GGCGGGCGGA TGTCTGTTGA TCGCCGGGTC GGCCATGGCC
GCTCTCTGTT ACCTTTCGGG GCATAAGACG ATGGCGGCCT ATCTCGAAAT GACCCATGTC
GTCGGTGCGG GGGAGTTGTG CATTGTCTAT GGAGCGATGA CCGGGGCGAT CCTGGGTTTT
CTCTGGTTCA ATTGTCATCC GGCCATGGTC TTTATGGGGG ATACTGGCTC ACTGCCACTG
GGGGCTTTGC TGGCATTTGG AGCCCTTGTC ATTCGGCAGG AACTCCTGCT GATGATGATT
GGCGGGATCT TTGTTGTGGA AACTTTGAGT GTGATAGCTC AAGTTGCGTC CTTCAAATTG
ACGGGCAAAC GCGTACTCCT CTGCTCGCCA CTGCATAACC ACTTCGTCTT TCGAGGTGAT
CCGGAAACTC GGATCGTGGT GAGATTTTGG ATTGGAGCGG CTGTGTTGGC ATTGTTGGCT
GTGGCCAGCC TCAAGCTCCG ATAA
 
Protein sequence
MLFWLLNMYA DEISRWQSTS PGETRVYLTA RTALATFSSF LVAIFYGPFA IRWLKSNFQE 
RIDSASARLN ELHSSKKSTP TMGGLFIVVA IVVAALLCGD LSNRYLQLAL LTVVLFGAIG
AIDDWVKNRT SRRGLTARQK FAAQCIASML VLFPLYWNLR AAPQLEDLPL NLGLATISLG
PAFVLWGSFV MVGSSNGVNL TDGLDGLAGG CLLIAGSAMA ALCYLSGHKT MAAYLEMTHV
VGAGELCIVY GAMTGAILGF LWFNCHPAMV FMGDTGSLPL GALLAFGALV IRQELLLMMI
GGIFVVETLS VIAQVASFKL TGKRVLLCSP LHNHFVFRGD PETRIVVRFW IGAAVLALLA
VASLKLR