Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1118 |
Symbol | |
ID | 9137805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 1419878 |
End bp | 1420522 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | regulatory protein TetR |
Protein accession | YP_003629152 |
Protein GI | 296121374 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTGCTG CCAGAGATTC ACAAAAAACG AAAGCCACAG TGATTCAGGC CGCAGGCGAA TTGTTCGCAA TTTCGGGCTT CTCCGGCGTT ACTGCCAGGC AAGTTGCCTC AAAGGCTGGC GTTTCTCTGG GGGCGATTCC TTACCACTTT GGAAGCATGG AAAAGCTGTA CGACGAAGTG CTCATTACGG CAGTCAAGAT ATCCGAGGAG GCCCAGCCCC TGGCGGAGCA AGCCCTCGCA GCTGCTCCCG CTGAGGGTCT TCGGTTGGCC ATCCAATGGA TGATCAAAGA TTACTCAGCT CAAAAGGTCG CGTGGCCCCT GAAGCTGATT GAACGCGAAG CCATCGATCC GTCAGCCTCG TTTAGGAAGG TTCTCAAGCG GCATTACTTG CCCGAGTTTG ATTGGCTCTG CGAAGTGATC AGCCGCGCTT CTGGCAAGTC CAAGGACTCT GACTCTGTTC GGTTCGGCAC GATTTCGATG CATCTTCTCA CTTCGACCTT TATGACGCAC CGACGGCTTC TTGAAGACTT CGCACCCAGG GTTGTCGAAA ATGTTCGAGA AAGCGAATCC TTTGTGGAAA TGATCGCTCA CGTGACCCTC GATGCGGTCA CTCGCTACGA ACAGGCGTAC CCGACAATAA ATTGA
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Protein sequence | MGAARDSQKT KATVIQAAGE LFAISGFSGV TARQVASKAG VSLGAIPYHF GSMEKLYDEV LITAVKISEE AQPLAEQALA AAPAEGLRLA IQWMIKDYSA QKVAWPLKLI EREAIDPSAS FRKVLKRHYL PEFDWLCEVI SRASGKSKDS DSVRFGTISM HLLTSTFMTH RRLLEDFAPR VVENVRESES FVEMIAHVTL DAVTRYEQAY PTIN
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