Gene Plim_1118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1118 
Symbol 
ID9137805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1419878 
End bp1420522 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content54% 
IMG OID 
Productregulatory protein TetR 
Protein accessionYP_003629152 
Protein GI296121374 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGCTG CCAGAGATTC ACAAAAAACG AAAGCCACAG TGATTCAGGC CGCAGGCGAA 
TTGTTCGCAA TTTCGGGCTT CTCCGGCGTT ACTGCCAGGC AAGTTGCCTC AAAGGCTGGC
GTTTCTCTGG GGGCGATTCC TTACCACTTT GGAAGCATGG AAAAGCTGTA CGACGAAGTG
CTCATTACGG CAGTCAAGAT ATCCGAGGAG GCCCAGCCCC TGGCGGAGCA AGCCCTCGCA
GCTGCTCCCG CTGAGGGTCT TCGGTTGGCC ATCCAATGGA TGATCAAAGA TTACTCAGCT
CAAAAGGTCG CGTGGCCCCT GAAGCTGATT GAACGCGAAG CCATCGATCC GTCAGCCTCG
TTTAGGAAGG TTCTCAAGCG GCATTACTTG CCCGAGTTTG ATTGGCTCTG CGAAGTGATC
AGCCGCGCTT CTGGCAAGTC CAAGGACTCT GACTCTGTTC GGTTCGGCAC GATTTCGATG
CATCTTCTCA CTTCGACCTT TATGACGCAC CGACGGCTTC TTGAAGACTT CGCACCCAGG
GTTGTCGAAA ATGTTCGAGA AAGCGAATCC TTTGTGGAAA TGATCGCTCA CGTGACCCTC
GATGCGGTCA CTCGCTACGA ACAGGCGTAC CCGACAATAA ATTGA
 
Protein sequence
MGAARDSQKT KATVIQAAGE LFAISGFSGV TARQVASKAG VSLGAIPYHF GSMEKLYDEV 
LITAVKISEE AQPLAEQALA AAPAEGLRLA IQWMIKDYSA QKVAWPLKLI EREAIDPSAS
FRKVLKRHYL PEFDWLCEVI SRASGKSKDS DSVRFGTISM HLLTSTFMTH RRLLEDFAPR
VVENVRESES FVEMIAHVTL DAVTRYEQAY PTIN