Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1115 |
Symbol | |
ID | 9137802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 1416871 |
End bp | 1417914 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | secretion protein HlyD family protein |
Protein accession | YP_003629149 |
Protein GI | 296121371 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.719605 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGATCA GATTTGGTAC GCCCCTCTTG GCGGCCCTGG CCATGGGATT TGGAATTGCA ACGTTGACTC ATCTCACGCC CAAAGAGCAA CTCACCCCAG CACCCAATCC TCCCACTTCA TCGACGATTA GCGAAAGCAC GATCTCGGGT CTCGGAGAGG TTCAGATGGC AGGAGAACCC ATCGCGATCG CCACCCCGCT CTCTGGAATT GTCACCCGCG TACACGTGGT CACTGGCCAG TCAGTTCGAG CCGGAGATCC TTTGTTCACA CTCGACGATC GCGCACTCAC TGGCGAACTC AATTTTCGCA AGGCGACACT GGCCACCGCC CAGGCGAAAC TGGGCAAATT AGAAGCAGGC ACGCGGCCAG AAGATTTTCC ATCAAGCCGC GCCAAGGTCG AAGCCATGAC GGCATTATTC AAACGAAGTG AAGACGCATG GAATCGCGCT AAACTCTTGA TTGACAAACG GGCCTTGAGC GAAGAAGAGC AGAATGCTCG TCGCTATCTG TACGAACAGT CCGCCGCAGA ACTGTCTCAA GCAAAAGCCG ATCTGGCAAA ACTCGAAGCG GGGACATGGA AACACGATCT CGAAATCGCC CAGCGCGAAG TGGAGGCTGC AGCCGCCAGT CTGGCGATGA TACAGATCGA TCTCGATCGT TTGGTGATTC GTGCCCCTGT TGATGGTCTC GTGCTTCACG CAGACGTCCG GCCCGGAGAA TTTGCCGAAG CAGGGAATCG CGACAAACCG CTGATCCAGC TTGGGCAGCA CGGACCACTT CGAGTTCGCG TGCAAATCGA TGAAGAAGAT GCCATCAGGG TCAAAGCCAA TTCGAAAGCC GAAGCATTTG TTCGCGGAAG GGACAGAACG GCCGTCAAAC TTCAATTCGT CCGCATCGAT CCGCGGATCG TTCCCAAAAG TTCGCTGACC GGCGGCACAA CAGAACGGGT AGATACCCGC GTCCTCTTTG TAGTTTATGA AGTCGTTGAA AACCCCACCC GGATCTACGC TGGCCAGAAA CTCGACGTTT TTATGGAGGG CTAA
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Protein sequence | MLIRFGTPLL AALAMGFGIA TLTHLTPKEQ LTPAPNPPTS STISESTISG LGEVQMAGEP IAIATPLSGI VTRVHVVTGQ SVRAGDPLFT LDDRALTGEL NFRKATLATA QAKLGKLEAG TRPEDFPSSR AKVEAMTALF KRSEDAWNRA KLLIDKRALS EEEQNARRYL YEQSAAELSQ AKADLAKLEA GTWKHDLEIA QREVEAAAAS LAMIQIDLDR LVIRAPVDGL VLHADVRPGE FAEAGNRDKP LIQLGQHGPL RVRVQIDEED AIRVKANSKA EAFVRGRDRT AVKLQFVRID PRIVPKSSLT GGTTERVDTR VLFVVYEVVE NPTRIYAGQK LDVFMEG
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