Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1107 |
Symbol | |
ID | 9137794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 1407509 |
End bp | 1408924 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | sun protein |
Protein accession | YP_003629141 |
Protein GI | 296121363 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCATGCCC CAGATATTTC AGTGCTGCCT CCCATGCAAT TGCTGGCCCC GCGCACTGCC CGCGAACTGG CCTTTAATGT GCTCGAAGCT CACCATGCCG GCAACAAGCA TATCGGCGAA GTCTTCGATC AGGCTGTGGA TCGAACGACA CTCTCTCCCA GTGATCGCCG GCTGGCTTAT GAACTGATTT GCGGGATCGT ACGCCGCCAG TCGACATTGC AGGCGCTGCT GATGTCACTG GTTCATCGAC AGATGGAAAC GCTCGAAAGA CCGCTGCAGA CGATCATCAA GATTGGTCTG TATCAGATCT TTCTGTGCCA GGGTATTCCG CAACATGCGG CTGTTCACGA GACGGTTGAG CTGGCCAAGC GTGCGAACCT GCGCTGGGGT GGCTTTGTGA ACGGTGTTCT CCGCAGTGCG ATTCAGCTCA TGACGGAGAA CATTCTCACA GCACCTTCAT CGAAAGCGTT GCCGATCGGT CATCATCAGT ATCGAGAACT GACGACCGAT CTCTTCCCTT CGCCGACATT GACACCTGGG TCTTATATTG CCGCTGCCTT CAGTTTTCCT CACGATCTTG TTGAGCGATG GGTTGGACAA TATGGGGTCG AAGCGACGAT TCGCATGGCC TTCTGGTTCA ATCAAGTCAC CGAGACAGCC CTGCGGGTGA ACCTGCTGAA GACCGATCGC GAGACGTTCC GGCAGAAGCT CTTTGCAGCC GATTTCGTAG CGGAAGCTGG TGATTTGCCG GAAACGATTC GACTCCTTTC GACTGTGCGG ATCAGCACGT TACCTGGTTT TCCGGAAGGG GAATTCTCGG TGCAGGATCT CTCGGCTCAA CATGCGGCCA GGCGATTGAA TCCACAGCCG GGTGAAGTTG TGCTCGACCT GTGTGCGGCT CCGGGTTCGA AAACCTGTCA CATGGCGGAA CTGATGCAGA ACCAGGGCGA GATCATCGCT GCGGATACTC ATGGTGGCCG CATTCGTCAG GTGTATGAGA ATGCCGAGCG GCTGGGGCTG TCGATCATTC GGACGATCAC CATTGGGCCA CGCGGCGAGA ACCTGCCTTC GATGGAGTTC GATAAAGTTC TGGCGGATGT CCCTTGTTCG AATACCGGCG TGCTGGGAAA GCGTCCTGAG GCGCGATGGA AGTATTCACC CGCTCATCTC GATGAACTGC GCGAGATGCA AGCGACAATC CTGCGCACGG CTGCCGGTAA AGTCCGCATT GGCGGCCGAA TTTTGTATTC GACGTGCAGT ATTGAGCCTT TGGAGAATGA AGAGATTGTC CAGCAGTTTC TGGCGGCGAC GAGCGAGGCG GGTGGGCCAC AATTCCGACT GGTTGAAGAG CAGAAGTTTA TGCCCGGGAG CCCAGCCGAT GGTGCTTATC AGGCTCTGAT CGAGCGGGTT TCGTAA
|
Protein sequence | MHAPDISVLP PMQLLAPRTA RELAFNVLEA HHAGNKHIGE VFDQAVDRTT LSPSDRRLAY ELICGIVRRQ STLQALLMSL VHRQMETLER PLQTIIKIGL YQIFLCQGIP QHAAVHETVE LAKRANLRWG GFVNGVLRSA IQLMTENILT APSSKALPIG HHQYRELTTD LFPSPTLTPG SYIAAAFSFP HDLVERWVGQ YGVEATIRMA FWFNQVTETA LRVNLLKTDR ETFRQKLFAA DFVAEAGDLP ETIRLLSTVR ISTLPGFPEG EFSVQDLSAQ HAARRLNPQP GEVVLDLCAA PGSKTCHMAE LMQNQGEIIA ADTHGGRIRQ VYENAERLGL SIIRTITIGP RGENLPSMEF DKVLADVPCS NTGVLGKRPE ARWKYSPAHL DELREMQATI LRTAAGKVRI GGRILYSTCS IEPLENEEIV QQFLAATSEA GGPQFRLVEE QKFMPGSPAD GAYQALIERV S
|
| |