Gene Plim_1107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1107 
Symbol 
ID9137794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1407509 
End bp1408924 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content56% 
IMG OID 
Productsun protein 
Protein accessionYP_003629141 
Protein GI296121363 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCATGCCC CAGATATTTC AGTGCTGCCT CCCATGCAAT TGCTGGCCCC GCGCACTGCC 
CGCGAACTGG CCTTTAATGT GCTCGAAGCT CACCATGCCG GCAACAAGCA TATCGGCGAA
GTCTTCGATC AGGCTGTGGA TCGAACGACA CTCTCTCCCA GTGATCGCCG GCTGGCTTAT
GAACTGATTT GCGGGATCGT ACGCCGCCAG TCGACATTGC AGGCGCTGCT GATGTCACTG
GTTCATCGAC AGATGGAAAC GCTCGAAAGA CCGCTGCAGA CGATCATCAA GATTGGTCTG
TATCAGATCT TTCTGTGCCA GGGTATTCCG CAACATGCGG CTGTTCACGA GACGGTTGAG
CTGGCCAAGC GTGCGAACCT GCGCTGGGGT GGCTTTGTGA ACGGTGTTCT CCGCAGTGCG
ATTCAGCTCA TGACGGAGAA CATTCTCACA GCACCTTCAT CGAAAGCGTT GCCGATCGGT
CATCATCAGT ATCGAGAACT GACGACCGAT CTCTTCCCTT CGCCGACATT GACACCTGGG
TCTTATATTG CCGCTGCCTT CAGTTTTCCT CACGATCTTG TTGAGCGATG GGTTGGACAA
TATGGGGTCG AAGCGACGAT TCGCATGGCC TTCTGGTTCA ATCAAGTCAC CGAGACAGCC
CTGCGGGTGA ACCTGCTGAA GACCGATCGC GAGACGTTCC GGCAGAAGCT CTTTGCAGCC
GATTTCGTAG CGGAAGCTGG TGATTTGCCG GAAACGATTC GACTCCTTTC GACTGTGCGG
ATCAGCACGT TACCTGGTTT TCCGGAAGGG GAATTCTCGG TGCAGGATCT CTCGGCTCAA
CATGCGGCCA GGCGATTGAA TCCACAGCCG GGTGAAGTTG TGCTCGACCT GTGTGCGGCT
CCGGGTTCGA AAACCTGTCA CATGGCGGAA CTGATGCAGA ACCAGGGCGA GATCATCGCT
GCGGATACTC ATGGTGGCCG CATTCGTCAG GTGTATGAGA ATGCCGAGCG GCTGGGGCTG
TCGATCATTC GGACGATCAC CATTGGGCCA CGCGGCGAGA ACCTGCCTTC GATGGAGTTC
GATAAAGTTC TGGCGGATGT CCCTTGTTCG AATACCGGCG TGCTGGGAAA GCGTCCTGAG
GCGCGATGGA AGTATTCACC CGCTCATCTC GATGAACTGC GCGAGATGCA AGCGACAATC
CTGCGCACGG CTGCCGGTAA AGTCCGCATT GGCGGCCGAA TTTTGTATTC GACGTGCAGT
ATTGAGCCTT TGGAGAATGA AGAGATTGTC CAGCAGTTTC TGGCGGCGAC GAGCGAGGCG
GGTGGGCCAC AATTCCGACT GGTTGAAGAG CAGAAGTTTA TGCCCGGGAG CCCAGCCGAT
GGTGCTTATC AGGCTCTGAT CGAGCGGGTT TCGTAA
 
Protein sequence
MHAPDISVLP PMQLLAPRTA RELAFNVLEA HHAGNKHIGE VFDQAVDRTT LSPSDRRLAY 
ELICGIVRRQ STLQALLMSL VHRQMETLER PLQTIIKIGL YQIFLCQGIP QHAAVHETVE
LAKRANLRWG GFVNGVLRSA IQLMTENILT APSSKALPIG HHQYRELTTD LFPSPTLTPG
SYIAAAFSFP HDLVERWVGQ YGVEATIRMA FWFNQVTETA LRVNLLKTDR ETFRQKLFAA
DFVAEAGDLP ETIRLLSTVR ISTLPGFPEG EFSVQDLSAQ HAARRLNPQP GEVVLDLCAA
PGSKTCHMAE LMQNQGEIIA ADTHGGRIRQ VYENAERLGL SIIRTITIGP RGENLPSMEF
DKVLADVPCS NTGVLGKRPE ARWKYSPAHL DELREMQATI LRTAAGKVRI GGRILYSTCS
IEPLENEEIV QQFLAATSEA GGPQFRLVEE QKFMPGSPAD GAYQALIERV S