Gene Plim_1089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1089 
Symbol 
ID9137775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1385840 
End bp1386808 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content57% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003629125 
Protein GI296121347 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATGT TGACCACAGA ACCCGAGCCT GCTCAGCAGG CTCCTCGTCC TCGCCCGCTG 
GCACGGGAAC TTCAGGAGAT CACCACGGCT GTCCGAGTCA GTTTTCATTG GCTGGGGACC
AGTCGTTCGC TGACTCATAG CCAGAAGGCT CAGGCTGCGG AATCTTTTGG TGCCGCCGAA
AAGTTTCTCT CGGCGGGCAA GAAACTCTTT GATACGAGTG CTCCCGCCTA TCGCCAAGTA
ACTGCGGTTC GCAGTCGGAT TGTCCAATAC TGGAAAAGCA CGACGCTCCC CTTTCCGGAA
CCTGGGATTC GACTCCTCCG CAAAGAACGT CTGGGAATCT TTGAAGCCCA ACTGACGGAG
TTTCGCCAGG AACTCGAAGA GGCTGTGGAG CGGCTCGAAG AAGAATTCGA GACACTCCAG
CAGCAGGCCC GGGAACGACT GGGCTCGCTC TATGATCCTC GGGATTATCC TCACTCCCTG
CGGCAGGAGT TTGCTGTCGA ATGGGATTAT CCCAGTGTGA CTCCTCCGGA TCACCTGCAG
CAGTTGGCTC CCGAACTCTA TGCCCGGGAA TGTGCCCGCG TTTCGGCCCG CTTTGAAGAA
GCCATGCAAC TGGCCGAAAC CGCCTTCCTC GAAGAATTCA ATGGGCTGAT TACGCATCTC
TGCGAACGGA TGAGCGGTCA GTCGGGAGCT TCTCCCAAAG TCTTCCGGGA TTCGGCGGTC
TCACGACTCC ATGAGTTCTT CGAGAGGTTT CGCACTCTGC AGATTGGCTC TCACGAACAG
CTCGAAGGAC TCGTGCAGCA GGCTCAAAGC CTTCTCCGCG GCATCACTCC CCAGCAACTG
CGGGATCACT CTTCTCTGCG TCAGCACGTC TCCCGGCAGA TGTCAGCTGT TCAATCCCAA
CTCGATCAAC TCCTCGTTGA TCGTCCCCGA CGTTCGATCA TGCGTCCCTC CACGGGAGAG
GAGGCATGA
 
Protein sequence
MTMLTTEPEP AQQAPRPRPL ARELQEITTA VRVSFHWLGT SRSLTHSQKA QAAESFGAAE 
KFLSAGKKLF DTSAPAYRQV TAVRSRIVQY WKSTTLPFPE PGIRLLRKER LGIFEAQLTE
FRQELEEAVE RLEEEFETLQ QQARERLGSL YDPRDYPHSL RQEFAVEWDY PSVTPPDHLQ
QLAPELYARE CARVSARFEE AMQLAETAFL EEFNGLITHL CERMSGQSGA SPKVFRDSAV
SRLHEFFERF RTLQIGSHEQ LEGLVQQAQS LLRGITPQQL RDHSSLRQHV SRQMSAVQSQ
LDQLLVDRPR RSIMRPSTGE EA