Gene Plim_1080 details

Gene Information

• Locus tag: Plim_1080
• ID: 9137766
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 1373113
• End bp: 1376523
• Gene Length: 3411 bp
• Protein Length: 1136 aa
• Translation table: 11
• GC content: 53%
• Product: AAA ATPase
• Protein accession: YP_003629116
• Protein GI: 296121338

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGTGAGG ACACTCATCA AGATGCCGCT GACTCGTTCA TTGGAGATGC GTGCGGGGAA 
CCCGCCCGAT TTCCCCAGGA ACTGACCCTG TCTAGCGGTG ATCCGACCTA TCTTCGAGAT 
GCTCGCAAGG CGGTACGCGA AGAACTGCGA ATCAGCTCAC GATGGGTCCG TCTGACTTGC 
CAGAAAGTGC ATGTGTTTTC CGAGAGTGAT CGTGGAGTAA TCTTTGCGAT CTATGTTGGC 
AGCGGTCTTG AGTTTGATTG GACGTGGGAA GGTGCCTTGG CCTTTCGGCC ACACGCTCTG 
GAGGAGAATG ATGCCATTGA CCTGGCCGAC TTTGAAGAAT CGCCTGTCGA AGAGGCCAGC 
CAGTGGTCAG GCGAAATTCT GGAAGTTGAT CCCCAACAGG GATGCTTGTT CATTAGCTTG 
ACCAGTTCGG ATCATCCTCC CACTGTGGGG ACATTTCTGG TCAGGCCCTT TGATTTTCTC 
GGTACCCTTG ATGACATTTA CCATGAAGAG CGGTTCCGGT CACTTTCTGA AGTTCTCAGT 
CAACGATTGA GCGCTGCCAC GGGGAGTCAA TCCCCCCAAG TCCGGCATAC CGCCGCTGGA 
GGACTCAAAG AACTCTCCCC ATGGTGGCAA TACAGTTGGA GTATGCTCTG GGGTCCACCC 
GGAACAGGCA AAACCTACAC CATCGGCCGT CAAGTGGCTG CCGCACTGGC GGACCCTACG 
GAACGAATTC TGGTTGTCTC CACGACCAAT CGGGCAACAG ATGCAGTGGC TTTATCGATC 
GGAACTGCTA CGGTCGAACT CGCAGACTCC CATGTTGAAG AACTAGGACT TGTTCGGATT 
GGACGCGGGG CGGCCGTCGA TCGATTTCAG AGCCATGGTC TTGACTCAAT GCTCGTTGGC 
ACAGAAACCG AGAAGTTGCG TGAGATCGAA TTGTTGAGTC GTCAACTGCC TCTGGTTGAC 
TCCTGGGAAG AGAAGGCCTT CCTTCGAAAG AAAATTCAAG AACTCCGATC CTCGGTGGGC 
GACCATGGGC GAGTCATCTT TACCCATCGC GACTTCCGGG TTGTGATCAC AACGTCGTTT 
AAGGCCCTCC AGTTTCTCCA CCAGGAGACA GTACGTTCGT TGCTGGAGCG TAACGAGGCC 
CCCTTCACGA CGATTGTGAT TGATGAAGCA GGTCTCATCT CCAGGGCAGC GACAGCGGCA 
CTTTCTCTTT TGGCAGCTCG ACGAGTTGTG TTGGTCGGTG ATTCCAAACA GCTGGCGCCC 
ATCAGTCGCG TGCGGCGCGT GTTGACGACG GTTCAACAGG CTTGGCTAGC CAGTAGTGGT 
GTCAGCCATC TTCATCACAT GACCAACGTC TCGCCTGCTG TCCATGTGCT AACAGAACAA 
CGGCGAATGC GTCCTGAGAT CTGTCAGGTC GTCTCGGCCT ATCAGTACGG TTCCATTCTG 
ACCACGGCTC CAGAAGTCAA CTCGCGACCT TGTCCATTGC CTCCATGTCT TAGCCAGCAG 
CCACGGGCCA TTTGGTACGT GATTGATGAA GAAAACAAAA ACCTGGCCTC CATTCGTGCC 
GAGCGTGGGC CAGGAAATCG GAGTTGGATT CGAAAGGGAT CTCTGGCCGT CTTGGAGAAG 
ATCCTGCAAG CATCGGAAAT GAGAACTTGC CATGGGCTTT TCATTTCTCC CTATGTCGCC 
CAGGCTCAAA TGTTTGGTCA ATGGTTTGCT GAAAACAGGC TCGAAAGCTG GGAAGCATCA 
ACGGTGCATC GTCAGCAGGG ATCAGAAGCT GATGTTGTGA TTTTTGACAC GGTGAACGCA 
GGGAGTCATC AATGGCCCCA TGACGAGTGG AAACGCTTGG TGAATGTGGC GATCAGTCGT 
GCACGAGAAG CCGTGATTGT GATCGCCAGT CGTAGTGAAA TGGAAGAACC CTATCTCAGT 
CCTCTAGGGC AATTGCTCAC CCCTCAAGTT CTGGTTAAGA AAAGAGGGGG AGTTCAGTGG 
CAGTCCGCAA GTCAGCTCAC ACCTCCTGAT GCCGATGAAC CTTGCGAGGG GGACGACACG 
TTGGGTGGGC AATTTGCCTT GCGCCGCAAG ATGAAGCCCA TTTTGTCCCA GGAACAGCAG 
CGACTGAGTC AACTGGAGTT GGATGGGAAA CCACGTCTGG TACGCGGTGT GGCGGGAAGC 
GGAAAGACCG TGGTCCTTTC CAATTGGCTG GCTCAGACAG CCAGTCGTTT GCAGGGTGAT 
CCCCAAGCAA AAATCTGGGC CGTTTACGCC AATCGAACAC TGCATAGTTT GCTCAGCAGT 
TCCATTGAGG CCGCCTGGAA GAATCAACGG AATCTACTGG AGTTCCCTTG GGACCAAGTG 
GAACTGATTC ATGTGCGCGA TCTGCTTGCG CAGCTCCTGC CGAGCGTCGG GCTTTCGATG 
GAGCAATACA AATTCAACTA CGATAAGGCC TCGGAGGACT TTTTGAATCA GCAGTCAGAA 
ACAACAATCC GACATTCATG CCGGGCCTTG TTTCTGGATG AAGCCCAGGA CATGGGCCCC 
CACACTCTGA GACTTCTCCT CTCCCTCGTG GAACAAACTC GACCTGAAGA CCACAACAGT 
CGGTCGGCAC ACATTTTCTT CGACAATGCC CAGAACTTAT ATGGTCGGAA AACACCAAAA 
TGGTCCGAGT TTGGCCTCGA TCTCCGTGGC CGATCGACCG TGATGAAAGA GAGCTTTCGC 
TCAACCCGTC CGATTACCGA GTTCGCTGTC AATGTTTTGC AGCGATTAGC GCCAACTGCC 
GATTTGCAGG ATCACAAAGA ACTCCAGTCA CTCGGACTTT TGACCAAAGA ATTGCGAGAT 
CGTGAAGAGT GGTTGCGAGT GGAATACAAC CAAATTGACG GACCCCGACC CTATGTTCGC 
CAGCACGCCA CCAGAGATCA CGAACTGGAA GTTCTCCAAA ACGATTTGGT GAAGCTTTTG 
ATTGACGAGA AAGTGCCACC AAATGATATC TGTCTGATTA TCAATGGGAA CTGGATTTGG 
GAACGGCTGC TGTCCGATGT CGCCCCGCGA CTGGAGCAGT TCAATGTCGA ACTCTCCCTG 
CAAAAAAGCC AGAAGTTCGA GCGGAAACGT AAGACATTGT TGGTGACGAC CGCAAATTCA 
TTCAAAGGCT ACGAAGCTGA AGTCGTGCTC ATTCCATGTG CCGATAATTT TATTGACTCA 
GACGATAACG TGCTGGCATC CAGTCTCTAC GTCGCCATGA CGAGAGCACG CTCTGTACTC 
GGCATCTACT CCACGCACAA CGCGAATTCA TCTGCTACAC TCCTGAATCA AACTCTTGCC 
CGATGTGGAC AACTTCTCAA GACGCCGCCA GCCATCAGGA CACTCAGTGG CCGAGAAGAA 
TTGGAAGACA TTATTCAGCA AAGTTCAGAT CATGGTTTGG AGAGTGACTA A 

 

Protein sequence

MREDTHQDAA DSFIGDACGE PARFPQELTL SSGDPTYLRD ARKAVREELR ISSRWVRLTC 
QKVHVFSESD RGVIFAIYVG SGLEFDWTWE GALAFRPHAL EENDAIDLAD FEESPVEEAS 
QWSGEILEVD PQQGCLFISL TSSDHPPTVG TFLVRPFDFL GTLDDIYHEE RFRSLSEVLS 
QRLSAATGSQ SPQVRHTAAG GLKELSPWWQ YSWSMLWGPP GTGKTYTIGR QVAAALADPT 
ERILVVSTTN RATDAVALSI GTATVELADS HVEELGLVRI GRGAAVDRFQ SHGLDSMLVG 
TETEKLREIE LLSRQLPLVD SWEEKAFLRK KIQELRSSVG DHGRVIFTHR DFRVVITTSF 
KALQFLHQET VRSLLERNEA PFTTIVIDEA GLISRAATAA LSLLAARRVV LVGDSKQLAP 
ISRVRRVLTT VQQAWLASSG VSHLHHMTNV SPAVHVLTEQ RRMRPEICQV VSAYQYGSIL 
TTAPEVNSRP CPLPPCLSQQ PRAIWYVIDE ENKNLASIRA ERGPGNRSWI RKGSLAVLEK 
ILQASEMRTC HGLFISPYVA QAQMFGQWFA ENRLESWEAS TVHRQQGSEA DVVIFDTVNA 
GSHQWPHDEW KRLVNVAISR AREAVIVIAS RSEMEEPYLS PLGQLLTPQV LVKKRGGVQW 
QSASQLTPPD ADEPCEGDDT LGGQFALRRK MKPILSQEQQ RLSQLELDGK PRLVRGVAGS 
GKTVVLSNWL AQTASRLQGD PQAKIWAVYA NRTLHSLLSS SIEAAWKNQR NLLEFPWDQV 
ELIHVRDLLA QLLPSVGLSM EQYKFNYDKA SEDFLNQQSE TTIRHSCRAL FLDEAQDMGP 
HTLRLLLSLV EQTRPEDHNS RSAHIFFDNA QNLYGRKTPK WSEFGLDLRG RSTVMKESFR 
STRPITEFAV NVLQRLAPTA DLQDHKELQS LGLLTKELRD REEWLRVEYN QIDGPRPYVR 
QHATRDHELE VLQNDLVKLL IDEKVPPNDI CLIINGNWIW ERLLSDVAPR LEQFNVELSL 
QKSQKFERKR KTLLVTTANS FKGYEAEVVL IPCADNFIDS DDNVLASSLY VAMTRARSVL 
GIYSTHNANS SATLLNQTLA RCGQLLKTPP AIRTLSGREE LEDIIQQSSD HGLESD