Gene Plim_1076 details

Gene Information

• Locus tag: Plim_1076
• ID: 9137762
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 1366825
• End bp: 1369002
• Gene Length: 2178 bp
• Protein Length: 725 aa
• Translation table: 11
• GC content: 49%
• Product: DEAD/DEAH box helicase domain protein
• Protein accession: YP_003629112
• Protein GI: 296121334

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0763366
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCACC ATCCCGATGA ACTTCTCGCC GAACCAATTC GGCGTAGCCT CTGGAGAATG 
GGCTGGAATA AGCTACGCCC ATTGCAGGAA CATGCTATTA CTGCTGTGAT GCAGAGAAAA 
TCAGATTTGA TTCTTGCAGC ACGGACTGCG GCTGGCAAAA CAGAGGCTGC GTTTCTGCCA 
ATCCTTTCAG ATGTCTGTAC TGCTCCTGTC GGATCTGTCA GAGCTCTCTA CATTGGGCCA 
CTCAAAGCAC TCATCAATGA TCAGTTTCGT CGTCTTGAAG AACTTTGTGA GTATGCAGAA 
ATCCCAGTCC ACCGTTGGCA TGGAGATGTT TCGGCCGACA AAAAGAAACA ACTTGTCACT 
TGCCCTGGAG GCGTCTTATT AATTACGCCG GAATCACTTG AATCGCTGTT AATTAACCGC 
AGTACAGCCT TATCTCGAAT CTTTCATTCC CTCTCCTTTG TCGTTATTGA CGAACTCCAT 
GCGTTGTTGG GAAATGAACG CGGCACGCAA CTCCGGAGTC AACTTTACCG GCTTGACCAC 
CACGCAATAA CACGGCCTCG AATCCTTGCG CTATCTGCAA CGATCGGTGA TCTCAAAGCT 
GCTGCCGAGT GGATCCGACC AGGCGACCAG GACTCTGTCG AGATTATCTG TGATGAAGGT 
GACGAGAAAC GGATTCAGTT TCGTCTGCAT GCGTATTCGC AGATATTGGA TAAAGACTCA 
GATCCATCAG ATCCTGAGTA TGTCTCACCG GAGGATGTCT TTCAGGAACT CTTTGACAAT 
TACCGCGGCT CAAAGAATTT GATTTTCGCG AACAGCAAAT CCGTCATTGA ATTGACGACT 
GATCGTCTGA ACGAACTTGG GAGAAAAAAT TCGACGGGAG AAGAGTTTCT AATCCATCAT 
GGATCAATCT CCAAAGACAT TCGCGAAGAG ACAGAGCGGC TGATGCAGGG CCAACGCCCT 
TATACTGCAA TTTGTTCTTC AACACTTGAA CTAGGGATCG ATATTGGAAA TGTTCGCGGA 
GTGGGTCAAA TTGGCCCCTG CTGGTCTGTA AGTTCGATGC TGCAGCGGTT GGGCCGGAGT 
GGACGTCGTG ATGGAGAAAC TCATCAGCTT CGCATGTTCA TCATTGAGAA GCATCCTGGA 
GCACATAGCG AACTTTCAGA TCGTCTCTAC CCAGACCTGC TCCAGGGAAT TGCGTTGACA 
GAACTGATGC TTGATCGATG GGTGGAATCT CCTCGCACAC GACCATTTGA TCTCAGTACG 
CTCACGCAAC AGATTCTCAG TGTTATCGCT GAAAGGGGTG GTATTTTAGC GACGTCACTC 
TTCGACCAAC TTGTTTGCGA TGGCGTCTTC AGTTTCATCA ACTCCCAGCA ATTCGTGACA 
CTTCTAAGGG GACTCGCAAG TCATGATTTG ATTGAACAAA CACCAGATGG CCTGTTGATA 
CTCGGGTTGT TCGGCGAACG ATTTGTTCGT CATTATGAAT TCTATGCGGC TTTCATTTCA 
CCTTTAGAAT ATCGAGTGGT TTCGGGAAGT CGTGTCCTGG GGCGACTCAC TAGGGAAAAT 
GTACCACCTC TGGGAGAACA TTTGATTCTT GCAGGCCGTC GCTGGCAGGT GGTGAATGTC 
GATCACGAGA GGGAAGAGGT TCAAGTACAG TCGGCCCGTG GTCGTAAACC CCCAATGTTT 
TTTAGTAGTG GTGGCGAGAT CGCTCATGAG ATTCGAGTAA AAATGCGAGA GGTGCTGCAA 
AGTTCCGCTG TCCCTGTTTA TCTGGATTCG TTTGCCGTGA AACTGCTGAA TGAAGCTCGT 
CAAGTTGCAA CGGATTCTGG GCTTGCCACA TCAGATGTTG TTCCGCTTAC CAATGACGTA 
GTTGAATGGT TTCCCTGGAC GGGAACAGCC GTGATGCGAA CGCTCCAACT GTTGTTTGAA 
TGGGCGGGCG TCTCAGCAGA ACTGCGACCG CGGGGCCTTT CCTTTTCGAT TGAATTTTGC 
GAGGAGAATC GATCCAGCCT GGAGCGAATT CTTCGCCAAA CGCCATTCGG ATTGGAATTG 
GCTCAACTGA GCCATCAACT TGTACGACGC AAATGGGATA ACTTTATCCC CGAGAGTTTG 
CTTCAGGAAT CGTTTGCCGC AGATTGCCTC GACTTACCTG GCGCACTCAG GTCCCTCAGA 
ACCTTCGTGA GCAATTAG 

 

Protein sequence

MKHHPDELLA EPIRRSLWRM GWNKLRPLQE HAITAVMQRK SDLILAARTA AGKTEAAFLP 
ILSDVCTAPV GSVRALYIGP LKALINDQFR RLEELCEYAE IPVHRWHGDV SADKKKQLVT 
CPGGVLLITP ESLESLLINR STALSRIFHS LSFVVIDELH ALLGNERGTQ LRSQLYRLDH 
HAITRPRILA LSATIGDLKA AAEWIRPGDQ DSVEIICDEG DEKRIQFRLH AYSQILDKDS 
DPSDPEYVSP EDVFQELFDN YRGSKNLIFA NSKSVIELTT DRLNELGRKN STGEEFLIHH 
GSISKDIREE TERLMQGQRP YTAICSSTLE LGIDIGNVRG VGQIGPCWSV SSMLQRLGRS 
GRRDGETHQL RMFIIEKHPG AHSELSDRLY PDLLQGIALT ELMLDRWVES PRTRPFDLST 
LTQQILSVIA ERGGILATSL FDQLVCDGVF SFINSQQFVT LLRGLASHDL IEQTPDGLLI 
LGLFGERFVR HYEFYAAFIS PLEYRVVSGS RVLGRLTREN VPPLGEHLIL AGRRWQVVNV 
DHEREEVQVQ SARGRKPPMF FSSGGEIAHE IRVKMREVLQ SSAVPVYLDS FAVKLLNEAR 
QVATDSGLAT SDVVPLTNDV VEWFPWTGTA VMRTLQLLFE WAGVSAELRP RGLSFSIEFC 
EENRSSLERI LRQTPFGLEL AQLSHQLVRR KWDNFIPESL LQESFAADCL DLPGALRSLR 
TFVSN