Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1076 |
Symbol | |
ID | 9137762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 1366825 |
End bp | 1369002 |
Gene Length | 2178 bp |
Protein Length | 725 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | DEAD/DEAH box helicase domain protein |
Protein accession | YP_003629112 |
Protein GI | 296121334 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0763366 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCACC ATCCCGATGA ACTTCTCGCC GAACCAATTC GGCGTAGCCT CTGGAGAATG GGCTGGAATA AGCTACGCCC ATTGCAGGAA CATGCTATTA CTGCTGTGAT GCAGAGAAAA TCAGATTTGA TTCTTGCAGC ACGGACTGCG GCTGGCAAAA CAGAGGCTGC GTTTCTGCCA ATCCTTTCAG ATGTCTGTAC TGCTCCTGTC GGATCTGTCA GAGCTCTCTA CATTGGGCCA CTCAAAGCAC TCATCAATGA TCAGTTTCGT CGTCTTGAAG AACTTTGTGA GTATGCAGAA ATCCCAGTCC ACCGTTGGCA TGGAGATGTT TCGGCCGACA AAAAGAAACA ACTTGTCACT TGCCCTGGAG GCGTCTTATT AATTACGCCG GAATCACTTG AATCGCTGTT AATTAACCGC AGTACAGCCT TATCTCGAAT CTTTCATTCC CTCTCCTTTG TCGTTATTGA CGAACTCCAT GCGTTGTTGG GAAATGAACG CGGCACGCAA CTCCGGAGTC AACTTTACCG GCTTGACCAC CACGCAATAA CACGGCCTCG AATCCTTGCG CTATCTGCAA CGATCGGTGA TCTCAAAGCT GCTGCCGAGT GGATCCGACC AGGCGACCAG GACTCTGTCG AGATTATCTG TGATGAAGGT GACGAGAAAC GGATTCAGTT TCGTCTGCAT GCGTATTCGC AGATATTGGA TAAAGACTCA GATCCATCAG ATCCTGAGTA TGTCTCACCG GAGGATGTCT TTCAGGAACT CTTTGACAAT TACCGCGGCT CAAAGAATTT GATTTTCGCG AACAGCAAAT CCGTCATTGA ATTGACGACT GATCGTCTGA ACGAACTTGG GAGAAAAAAT TCGACGGGAG AAGAGTTTCT AATCCATCAT GGATCAATCT CCAAAGACAT TCGCGAAGAG ACAGAGCGGC TGATGCAGGG CCAACGCCCT TATACTGCAA TTTGTTCTTC AACACTTGAA CTAGGGATCG ATATTGGAAA TGTTCGCGGA GTGGGTCAAA TTGGCCCCTG CTGGTCTGTA AGTTCGATGC TGCAGCGGTT GGGCCGGAGT GGACGTCGTG ATGGAGAAAC TCATCAGCTT CGCATGTTCA TCATTGAGAA GCATCCTGGA GCACATAGCG AACTTTCAGA TCGTCTCTAC CCAGACCTGC TCCAGGGAAT TGCGTTGACA GAACTGATGC TTGATCGATG GGTGGAATCT CCTCGCACAC GACCATTTGA TCTCAGTACG CTCACGCAAC AGATTCTCAG TGTTATCGCT GAAAGGGGTG GTATTTTAGC GACGTCACTC TTCGACCAAC TTGTTTGCGA TGGCGTCTTC AGTTTCATCA ACTCCCAGCA ATTCGTGACA CTTCTAAGGG GACTCGCAAG TCATGATTTG ATTGAACAAA CACCAGATGG CCTGTTGATA CTCGGGTTGT TCGGCGAACG ATTTGTTCGT CATTATGAAT TCTATGCGGC TTTCATTTCA CCTTTAGAAT ATCGAGTGGT TTCGGGAAGT CGTGTCCTGG GGCGACTCAC TAGGGAAAAT GTACCACCTC TGGGAGAACA TTTGATTCTT GCAGGCCGTC GCTGGCAGGT GGTGAATGTC GATCACGAGA GGGAAGAGGT TCAAGTACAG TCGGCCCGTG GTCGTAAACC CCCAATGTTT TTTAGTAGTG GTGGCGAGAT CGCTCATGAG ATTCGAGTAA AAATGCGAGA GGTGCTGCAA AGTTCCGCTG TCCCTGTTTA TCTGGATTCG TTTGCCGTGA AACTGCTGAA TGAAGCTCGT CAAGTTGCAA CGGATTCTGG GCTTGCCACA TCAGATGTTG TTCCGCTTAC CAATGACGTA GTTGAATGGT TTCCCTGGAC GGGAACAGCC GTGATGCGAA CGCTCCAACT GTTGTTTGAA TGGGCGGGCG TCTCAGCAGA ACTGCGACCG CGGGGCCTTT CCTTTTCGAT TGAATTTTGC GAGGAGAATC GATCCAGCCT GGAGCGAATT CTTCGCCAAA CGCCATTCGG ATTGGAATTG GCTCAACTGA GCCATCAACT TGTACGACGC AAATGGGATA ACTTTATCCC CGAGAGTTTG CTTCAGGAAT CGTTTGCCGC AGATTGCCTC GACTTACCTG GCGCACTCAG GTCCCTCAGA ACCTTCGTGA GCAATTAG
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Protein sequence | MKHHPDELLA EPIRRSLWRM GWNKLRPLQE HAITAVMQRK SDLILAARTA AGKTEAAFLP ILSDVCTAPV GSVRALYIGP LKALINDQFR RLEELCEYAE IPVHRWHGDV SADKKKQLVT CPGGVLLITP ESLESLLINR STALSRIFHS LSFVVIDELH ALLGNERGTQ LRSQLYRLDH HAITRPRILA LSATIGDLKA AAEWIRPGDQ DSVEIICDEG DEKRIQFRLH AYSQILDKDS DPSDPEYVSP EDVFQELFDN YRGSKNLIFA NSKSVIELTT DRLNELGRKN STGEEFLIHH GSISKDIREE TERLMQGQRP YTAICSSTLE LGIDIGNVRG VGQIGPCWSV SSMLQRLGRS GRRDGETHQL RMFIIEKHPG AHSELSDRLY PDLLQGIALT ELMLDRWVES PRTRPFDLST LTQQILSVIA ERGGILATSL FDQLVCDGVF SFINSQQFVT LLRGLASHDL IEQTPDGLLI LGLFGERFVR HYEFYAAFIS PLEYRVVSGS RVLGRLTREN VPPLGEHLIL AGRRWQVVNV DHEREEVQVQ SARGRKPPMF FSSGGEIAHE IRVKMREVLQ SSAVPVYLDS FAVKLLNEAR QVATDSGLAT SDVVPLTNDV VEWFPWTGTA VMRTLQLLFE WAGVSAELRP RGLSFSIEFC EENRSSLERI LRQTPFGLEL AQLSHQLVRR KWDNFIPESL LQESFAADCL DLPGALRSLR TFVSN
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