Gene Plim_1061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1061 
Symbol 
ID9137747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp1347924 
End bp1348655 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content58% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003629100 
Protein GI296121322 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.354212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAGAT GCACAGCACC AGTACGTGGT CATCGATCAG CCGCAGCGGC AGAAGCCTGT 
CCTGCATGTG GAGGTCGTAG TGGCCGTTAC AGCGGATATA GCGGCTACAG GGTGAGTTCG 
TACTCGTCGT ATTCCTCATC TACGAGTGGC AGCGGGATCA GTCGAAGCAT CGGCGGTAGC 
TCAAGCCGCA ATGTAAGGCC GCGCTGGTCA GGAGCGGGTT CAGTCCAGCT CTACACACCC 
GAAGAAGTGC GGGCGCTCAC TCCAATTCGC GAAGCCGTCG AAAAGCGAGC GTCCGTGCCT 
GGTATTCGGG ATGTTTTTCT CTGCCATGCG TGGGATGACC GGCAAGGCGC TGCCAAACAA 
CTGTCCGAAC TGCTTTTGGC AAGTGGCGTC TCGGTCTGGT TCAGCGAGAA TGACATTGGC 
CTCGGCGAAC CGTTCCTTCG TGCAATCGAC AAGGGATTGG CAAAAACGCG AATCGGAATC 
GTGCTAGTTA CTCCCGCGCT GCTGAAGCGA CTTCCGGCAG CGGGCGTTGC AGACAAGGAA 
CTTTCGGTGC TTCTCGCGCG TGACCAACTT GTTCCCATCG TGCATAACAC AACTTACGAT 
GCCCTCCGCG ATGTAAGTCC GATGCTGGCC TCGCGAAACG GCCTCGACAC ATCCGAAGAG 
CCGATGGCAG ATGTCGCCGC AAAGTTGGCC GAATTGGTCA GGGTGCCAGT AAGTGCAGGC 
CGATGCGGGT AG
 
Protein sequence
MSRCTAPVRG HRSAAAAEAC PACGGRSGRY SGYSGYRVSS YSSYSSSTSG SGISRSIGGS 
SSRNVRPRWS GAGSVQLYTP EEVRALTPIR EAVEKRASVP GIRDVFLCHA WDDRQGAAKQ 
LSELLLASGV SVWFSENDIG LGEPFLRAID KGLAKTRIGI VLVTPALLKR LPAAGVADKE 
LSVLLARDQL VPIVHNTTYD ALRDVSPMLA SRNGLDTSEE PMADVAAKLA ELVRVPVSAG 
RCG