| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1046 |
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| Symbol | |
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| ID | 9137732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 1320086 |
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| End bp | 1322794 |
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| Gene Length | 2709 bp |
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| Protein Length | 902 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | YD repeat protein |
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| Protein accession | YP_003629085 |
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| Protein GI | 296121307 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.101993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACGCG TGTGGCAGGC GGAGGGGGAA CGTTGTGGCG AGTTGTCGTT AGCCCTCTGG
GCCAACCTCT TCACGCGCAC TTACGATCCC ATCGGTCAAG TGGTGTCGCT CACTTATGCG
TATGGCCAGA CACTCCAGTG GAACTGGAAT GCCGTGGGCC AGCGCAGCCG ACTGATTCAT
CCGGGAGGTG CCCGCACAAC CTATAGCTAC GATGCCAACC AGCGGATGAG CACACTGGTG
AATCCCCTGT CTCAGCGAAC GACCTGGACC TATGACGCCA ATGGTCAGGT GCTGGATCAA
CTGGTCGCTA ACGGCACGCG GACCAGTTAC TCCTACGATG CAGCGGGCCG GACGACGCAA
GTCATTCATC GCGATGGCCT GGGAGAACCA ACGGCAGCCT ATATCTACGC TTATGATGCC
AATGGTCGTA AAGTGGAGAT GGAAGAGTTC GGCCCCACCA GTGAAGGCTG GAATGGGTTA
TCGCTCTCCG ACTGGTCCAA CCTGACTCTG GAGCAGTGGT CAACACTGAC ACTTTCAGGA
TCAGCCACAG GCCGGACCAC CTGGACTTAC GATCCAGTGG GTCAACTGGT GAGCGAAGCG
ATTACCGGGA TCAACGAGGT GAAAAACAGC TTCACCTACG ATCCGAGTGG AAACCGGCTG
AAACTGGAAA CACTCAGTGA TGGGATCACG ACGAGTGTGT ACAATGCAGC CAACCAGCTG
CTCATGGCAG AATCGCTCTC TGGCATCACC ACCTACAGTT ACGATCTCGC TGGCAACCGG
CGAAGCGTGG AAACACCAGT CGGCGAGATC ACGACCTACA CGTTCGACGT GCTGAACCAC
AACATCGCGG TGGAACTCCC GACATCCGAG GTGGTGACGT ACACTTGGGC TCCGGTTAAC
AAAGCCAACG ATGAACGGCA GATCCAGCGG GATGATGGGA TCGATATCAC CCGTTACCTC
TGGGACGATC AGGTCATTCT GCTGGAGACC GACGATACCA ATGTGGTGCT GGCAGAGAAC
ACCGCTCAAC CCGGCGGTTA TGGGATGGTG CTGAGCCGTA CCCAGGATGC AGACACCTCG
TTCTACCAGT TCGATGCCAT CGGCAGTACC CGCTCACTGA GTGACGGGAC GGGCACACTG
ACTGATGAAT ACAGCTATGA AGCGTTCGGC AAGGCGTTGG CGCAAACCGG CTCCACCGAG
AATCCTTACA CCTGGATCGG TGCGCAGGGT TACCGGGTAG AAGAGGCCAC GGGCGAGTAC
AACCTGCGGG CGCGGGACTA CGACCCTCAT GCAGCTAATT TCACTTCTGA GGATCCGCTG
GGGTTGGAGG CTGGGGATTC CAACTTCTAT CGGTACGTAG GAAATGATCC TGTCAATCAG
ACCGATCCGA GCGGAAAGTC CAATATCAAC TACCGTCTCG TCTGGGGAAC GGGTTCAAAA
TCTGGGGAAC TTCAGTTGTG TTGGGACGAG TCCGGTGTTT TTTGGGGAGT ACGAAAAACA
AAATGTGAAT CATTGGGCAC CATTGATGCG AACTCCCATG TTACAAGAGA TGTCTTATAT
ACCGGGGGAG TAGACGGAAA GGTGCTTCGA AACCCCAATT GCAAAGTCCA TTATACACAA
ATTGTCGAAT GGCTTCGAGA TGGTTCATTA CAACATGCTG CCGAAAATTA CGAAATTGAC
CTACTGTTCT ACAGAAATTG TTCTAACGAT CCTCAGCCTC ACAAGCCGCC CACCCCAGTA
AACCAGCCAT CCGCTCCCGC CGGTTCAACC TCGTGCGGCG TATCAGGGAC CTGCACAACG
TCTGCCACAA ACTGCTCCAC GCCCGCTCCA ACAAGCAACG ATAAAGTTCA TTGTAATTCC
ACCGGGACCG TTTGCTGCAA CGAAACAAAA TACTATTGTG ACATTACTAT CGCAAACACC
TGGACAGAGT CGGCGTTGCA AGCAATCCCT CACCGGGAGC GTTTGTATTT CGATCGCGGT
AACACGTCGA TTAATCCGGC GTGGGACATC GATTGGATTG CCTTTAAACA CATGGCCGAG
AAGCGGCAGG CACGCGGTGG AGTAACTTCA CTCAACAAGA GTATTGAAGA AGGAGCAGAC
GGAGTCGAGT TTGTGGCCCG CGAGGTCTTT GTAGCGGCGG ATACAGCGGA CAAGGTGATC
ATTTTCGTCA AAAAGCCCTG TTTTCAGACA GGGGCCGATG TCGCTCTCTC CTCCCTCCCA
TTTTCGGTTA CCTTTGTTCG GCAGTCTGCC TCCGTCAGTT TCAGCGGAGT CAACATCGAC
CTCAGTGATT TCTTCGGGAG GAAATTATTT AGAGCTGACG ACTTCTGGGA TGGTGGTCCA
GTGGGAATTC CATTAGCTGA AGCGGCTCTA GCTAAAATAC AGACGTTTGC AGAACATGTT
CTTCGAAAAC GGCGAAATGA CACAAGTCGA TACACCTCCT TCTCGACAAT GCTTAAAGAT
GCAAAAAGAT TCACAGACGC CCCCGACAAT CGTTATATCT CCAAGGCAGA GTTTGATGCG
TTACATAAAC TTGAGCAAGA TGGAATCATT AAGATACATA CTCCCGAATC GGTCTATCAG
AGGATGATGG CAGGAACAGC TGATGAAGTA AAAGAAGCAA AAGATGTGAG GGACGCAATG
ATAAGAAATC ATGAAATATT GATTGAAGGG CAGATTCCGG CAGGACTACT TAAGAGATGC
AAAAACTAA
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| Protein sequence | MRRVWQAEGE RCGELSLALW ANLFTRTYDP IGQVVSLTYA YGQTLQWNWN AVGQRSRLIH
PGGARTTYSY DANQRMSTLV NPLSQRTTWT YDANGQVLDQ LVANGTRTSY SYDAAGRTTQ
VIHRDGLGEP TAAYIYAYDA NGRKVEMEEF GPTSEGWNGL SLSDWSNLTL EQWSTLTLSG
SATGRTTWTY DPVGQLVSEA ITGINEVKNS FTYDPSGNRL KLETLSDGIT TSVYNAANQL
LMAESLSGIT TYSYDLAGNR RSVETPVGEI TTYTFDVLNH NIAVELPTSE VVTYTWAPVN
KANDERQIQR DDGIDITRYL WDDQVILLET DDTNVVLAEN TAQPGGYGMV LSRTQDADTS
FYQFDAIGST RSLSDGTGTL TDEYSYEAFG KALAQTGSTE NPYTWIGAQG YRVEEATGEY
NLRARDYDPH AANFTSEDPL GLEAGDSNFY RYVGNDPVNQ TDPSGKSNIN YRLVWGTGSK
SGELQLCWDE SGVFWGVRKT KCESLGTIDA NSHVTRDVLY TGGVDGKVLR NPNCKVHYTQ
IVEWLRDGSL QHAAENYEID LLFYRNCSND PQPHKPPTPV NQPSAPAGST SCGVSGTCTT
SATNCSTPAP TSNDKVHCNS TGTVCCNETK YYCDITIANT WTESALQAIP HRERLYFDRG
NTSINPAWDI DWIAFKHMAE KRQARGGVTS LNKSIEEGAD GVEFVAREVF VAADTADKVI
IFVKKPCFQT GADVALSSLP FSVTFVRQSA SVSFSGVNID LSDFFGRKLF RADDFWDGGP
VGIPLAEAAL AKIQTFAEHV LRKRRNDTSR YTSFSTMLKD AKRFTDAPDN RYISKAEFDA
LHKLEQDGII KIHTPESVYQ RMMAGTADEV KEAKDVRDAM IRNHEILIEG QIPAGLLKRC
KN
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