Gene Plim_1023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1023 
Symbol 
ID9137709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1293440 
End bp1294501 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content57% 
IMG OID 
Productnicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase 
Protein accessionYP_003629065 
Protein GI296121287 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCGCAAG ATCATCGTCC TCAACCGCTC ACGAATCAGG TGATTCGTGA GCATCTTGCT 
AGTCTTGCTA AACCGCCGGG AAGTCTGGGC CGACTCGAAG ATCTCGCCTT TGAACTCTGC
CGCATCCAGC AGACCTTGCG ACCAGTCTCC TCGCCACGCA AACTGATCGT GTTCGGCGGA
GATCATGGCG TCATCTCCGA AGGTGTGACC GCCTGGCCCG GCGAGATCAC GCAAATCATG
CTCGACACCA TCGCCAAGGG GAAAGCAGCT TCCAGCGCTC TGGCCATGGC GACTTCGACC
TCATTGGAAG TGTTCGATGT CGGCTCCTTT CGTGGCGGAG CTTTGCGACA TCAAGGTTCG
TCCTCGGTCC GTCGAGATTA CTGGATGCTG CCGGGGTCGC GCAACCTGGC GCAACAACCA
GCAATGACCG TCGATGAACT CGAGCAGGGA CTGACCGCAG GACGACAGAT TGCCCGGGAA
GTCGCTGCTC AAGGTTTTCG AATTGTGGCC GGTGGTGAAA TGGGAATTGG CAACACCACT
CCCGCCGCTT GCCTCACGAG CCTGATTTGT AACGAAAGTG GAGCACTCGT CGTGGGTCGC
GGCGCCGGCG CTGATGACGA AACACTTCAG AGAAAAACTC AAGTCGTTAC TCAGGCTGTC
GAGCGCGCAC GACAGCACGG GACGGGTCAA TTGCGAAAAC AACTCGCCGA AGTGACTGGT
GTCGAACTGG CAACTCTGGC AGGCTTTTTT GCAGAGTCAT CGCAACTCGG GATGGTGGTG
ATTCTTGATG GATTTATTGC CACAGCAGCG GCTCTCATGG CCGAAGTTCT CTGGCCAGAG
AGTCGTCGCA ACTGGATTGC CGCTCATTGT TCGACAGAAC CAGGTCATGC CATTGCACTC
AAGTTCTTAC AGCTCGATCC TTTTCTCAAT TGGCAGATGC GACTGGGTGA AGGGACAGGA
GCCCTGCTGC TGATGCCCAT GCTCGATGCC GCCTGTGCCA TCCTCTCCGA GATGACCACG
ATCGCCCAGT TGCAGACAGA GTTGGTTCAT TCCAGGACAT AA
 
Protein sequence
MSQDHRPQPL TNQVIREHLA SLAKPPGSLG RLEDLAFELC RIQQTLRPVS SPRKLIVFGG 
DHGVISEGVT AWPGEITQIM LDTIAKGKAA SSALAMATST SLEVFDVGSF RGGALRHQGS
SSVRRDYWML PGSRNLAQQP AMTVDELEQG LTAGRQIARE VAAQGFRIVA GGEMGIGNTT
PAACLTSLIC NESGALVVGR GAGADDETLQ RKTQVVTQAV ERARQHGTGQ LRKQLAEVTG
VELATLAGFF AESSQLGMVV ILDGFIATAA ALMAEVLWPE SRRNWIAAHC STEPGHAIAL
KFLQLDPFLN WQMRLGEGTG ALLLMPMLDA ACAILSEMTT IAQLQTELVH SRT