Gene Plim_1018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1018 
Symbol 
ID9137704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1285701 
End bp1286480 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content54% 
IMG OID 
Productprotein of unknown function DUF1559 
Protein accessionYP_003629060 
Protein GI296121282 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.524361 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCAGCG GAATCCTCTC TGTGTTGACT GCACTGCTGT TACCAGCCGT GATGGCAGCG 
CGGGAAACTG CACGGCGTAT GGAATGCACA AGTCATTTGC GTCAGATCGG GCTGGGGCTG
CATCAGTATC ACGAGACACA TTCGTGTCTT CCTTCCGCCT GGCTGACAGA CTCTCAAGGA
AAAACGGCTT ATGGCTGGGC GGCTGCTTTG TTGCCGTTTG TCGAACAGCA GGCCACATCA
GCAGTGATTC AGCGACAGGT GGGATTGAGC GATGTTTCTA ACGAGCAGGC CCGGTCGATT
GTGCTGCCAC TTTTGACCTG CCCTTCCGAT GTCGCACCAC CGGTCTTTGA GCTTTATGAA
CCTGGGCTGA CAACACCTTT CCTTACGTTG CCGCATGCGA GTTATCTTGG TGTTTATGGG
ACTTCAGAAG CTGATGAAAT TCGTCCGACT CCACCTGGGG ACGGTACCTT TATTAACGGG
CGCCCAGTGC GTTTATCCGA GTTAACCCGC GGCCTGAGCC AGGTGATGAT CGTGGGTGAG
CGATCGGTTT CTATGTTTGA TACGACATGG ATTGGTTTTG ATCGCCGGGA TGAAGATGCC
GAATGCCGGA TTTTAGGAAG CGCGCTGCAA CAGCCCAACT GCCAGACCTG TGATGAATGT
GAGTTCAGCA GCCGGCATGC AGGTCTGAGT CATTTTCTAT TCGGAGACGG CCATGTGCGT
GGCCTCTCGA ATTCTATTGA TCAGACGGTC TATCAACAAA TGGCGCGTCG TTTCGAGTAA
 
Protein sequence
MTSGILSVLT ALLLPAVMAA RETARRMECT SHLRQIGLGL HQYHETHSCL PSAWLTDSQG 
KTAYGWAAAL LPFVEQQATS AVIQRQVGLS DVSNEQARSI VLPLLTCPSD VAPPVFELYE
PGLTTPFLTL PHASYLGVYG TSEADEIRPT PPGDGTFING RPVRLSELTR GLSQVMIVGE
RSVSMFDTTW IGFDRRDEDA ECRILGSALQ QPNCQTCDEC EFSSRHAGLS HFLFGDGHVR
GLSNSIDQTV YQQMARRFE