Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1018 |
Symbol | |
ID | 9137704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 1285701 |
End bp | 1286480 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | protein of unknown function DUF1559 |
Protein accession | YP_003629060 |
Protein GI | 296121282 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.524361 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCAGCG GAATCCTCTC TGTGTTGACT GCACTGCTGT TACCAGCCGT GATGGCAGCG CGGGAAACTG CACGGCGTAT GGAATGCACA AGTCATTTGC GTCAGATCGG GCTGGGGCTG CATCAGTATC ACGAGACACA TTCGTGTCTT CCTTCCGCCT GGCTGACAGA CTCTCAAGGA AAAACGGCTT ATGGCTGGGC GGCTGCTTTG TTGCCGTTTG TCGAACAGCA GGCCACATCA GCAGTGATTC AGCGACAGGT GGGATTGAGC GATGTTTCTA ACGAGCAGGC CCGGTCGATT GTGCTGCCAC TTTTGACCTG CCCTTCCGAT GTCGCACCAC CGGTCTTTGA GCTTTATGAA CCTGGGCTGA CAACACCTTT CCTTACGTTG CCGCATGCGA GTTATCTTGG TGTTTATGGG ACTTCAGAAG CTGATGAAAT TCGTCCGACT CCACCTGGGG ACGGTACCTT TATTAACGGG CGCCCAGTGC GTTTATCCGA GTTAACCCGC GGCCTGAGCC AGGTGATGAT CGTGGGTGAG CGATCGGTTT CTATGTTTGA TACGACATGG ATTGGTTTTG ATCGCCGGGA TGAAGATGCC GAATGCCGGA TTTTAGGAAG CGCGCTGCAA CAGCCCAACT GCCAGACCTG TGATGAATGT GAGTTCAGCA GCCGGCATGC AGGTCTGAGT CATTTTCTAT TCGGAGACGG CCATGTGCGT GGCCTCTCGA ATTCTATTGA TCAGACGGTC TATCAACAAA TGGCGCGTCG TTTCGAGTAA
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Protein sequence | MTSGILSVLT ALLLPAVMAA RETARRMECT SHLRQIGLGL HQYHETHSCL PSAWLTDSQG KTAYGWAAAL LPFVEQQATS AVIQRQVGLS DVSNEQARSI VLPLLTCPSD VAPPVFELYE PGLTTPFLTL PHASYLGVYG TSEADEIRPT PPGDGTFING RPVRLSELTR GLSQVMIVGE RSVSMFDTTW IGFDRRDEDA ECRILGSALQ QPNCQTCDEC EFSSRHAGLS HFLFGDGHVR GLSNSIDQTV YQQMARRFE
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