Gene Plim_1016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1016 
Symbol 
ID9137702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1284004 
End bp1285143 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content52% 
IMG OID 
Productpeptidase M56 BlaR1 
Protein accessionYP_003629058 
Protein GI296121280 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.196488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTCAG CTCAATTTCT GGAATTTCTA GTCTCGCTTT CCATTCAGGC CACAGTAGTT 
GTCGGTATTA CGGAATGGCT TTGTCGCGTT TCCCGATGGC CACAGGCACA ATACAAGCTC
TGGAATTATT GCAATCTCCT GCTTCTATTG ATGACTGGCT GTGGTTTGCT ACTGCCTCAT
TTGCGAGTGC TGACGAATCC ATGGCAAGTC ATGAGTCCAG CGGCCTTGCA GCAACTGGTC
TCTGTTGAAC AATCGCTTGG TCAGCTGGCT CTCGTCATCT GGGGGACAGG AATACTCTTG
TCGTTCATCA TGCTCGCCTC GGAGTGGATG ATGGTGGCGA GGTTTCTCAA GTCGTGCCGG
CCGGCGACAG AGAGTGAAGT GAAACTGGTT TTTCACGACC CAGCTAACAA TTTGACCAGT
CGAATCCTGC AACCGAATGC TTCGATTCAA CTGTTGATCA GCCAGCGTTT CAACAGCCCG
TTCTGTTATC AATGGCATGC ACCAGTTCTC GTGCTGCCAG AATATTTACT GAGCCTGCCT
CAAGACGAAA CCACTTTCAT CACCCGCCAC GAACTCTCCC ATTTACGCAG TGGTCATCCA
CTGCAGTTAT TTATTGAGCG TCTGGTAATG ACATTATTCT GGTTTCATCC GGCGATCTGG
TGGGCTTCAC GGCAATCGAT GCTAGCCAGG GAATATGCCT GCGATGATGC GGCCATTTCC
GCGCGGTATG AAGTTGTGGG ATATCTCAAA ACATTACTCG CTGTGGCGGA ACGGGGATTT
CATAAAGAGC CTGAAGGATC GGCTCTATAC TTCGGCAGCG GTAGTAACAT GATGGCGTTG
CGGGGGCGAA GAATACTGGA CCGCTTTGAG TCAGCAGCAG AGTGGTCGCA GCCAGATCAA
CGTGCCAGGT GGTGGCCATT CCATCTGCTG ACGGCTATGG CCATTGTCAC CTGGTCTTTC
TGGTTGCCCG TCGATGCACT GGCTTCATCG CGAATGCAGT GGTCTCCGTG GCCTGGATGG
TCAGCCGCTG TTCTGCGAAC GATCGATATC CCCGCCCGGG ATTATGAACC TTATGACCGG
ACGACTCGCC TGCATGAACT GTCGCTGGAG TTCAGCCAGC CTCATGCTTC GTCGCAATAA
 
Protein sequence
MNSAQFLEFL VSLSIQATVV VGITEWLCRV SRWPQAQYKL WNYCNLLLLL MTGCGLLLPH 
LRVLTNPWQV MSPAALQQLV SVEQSLGQLA LVIWGTGILL SFIMLASEWM MVARFLKSCR
PATESEVKLV FHDPANNLTS RILQPNASIQ LLISQRFNSP FCYQWHAPVL VLPEYLLSLP
QDETTFITRH ELSHLRSGHP LQLFIERLVM TLFWFHPAIW WASRQSMLAR EYACDDAAIS
ARYEVVGYLK TLLAVAERGF HKEPEGSALY FGSGSNMMAL RGRRILDRFE SAAEWSQPDQ
RARWWPFHLL TAMAIVTWSF WLPVDALASS RMQWSPWPGW SAAVLRTIDI PARDYEPYDR
TTRLHELSLE FSQPHASSQ