| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1009 |
|---|
| Symbol | |
|---|
| ID | 9137695 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 1276682 |
|---|
| End bp | 1277488 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003629051 |
|---|
| Protein GI | 296121273 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.9022 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAC GACCAACGAC TCTTTACAAG TATGAACCAT TTACACTCCG AGCAATTCAG
AATCTAAAAC AACAATCTCT ATATTTTGGA CCTCCATCTA GTTTCAATGA TCCGTATGAT
TGTGCCCTGA CGCCGCGATT TAAGGCACCA ACAGACATTG AGGTTTGCGC GGTGTTAGCG
AAGCTTATTT CAAGTCCAGA TACGCCAAAA GAAATCAAGC AGCAATTGGA ATTGTCACCG
ATTCCAACCC TGAAAGAACA ATTGGTGGCA TCCACTAGAT TTCTCGTTGA AAAAAAATGT
AACGAATTCA ACACCTCGCA TGGAATTAGC TGCTTTTCCG AGATTAACAA CAACCTACTG
ATGTGGTCAC ACTACGGAGG GCAGCATCGT GGGTTTTGTT TAGAATTTAG TACTGACTTT
GAGCCCTTTA TTAAAATTCA CCGGGTCACC TATGGCACAG ACATTCCGGA GGTAAGTGTG
TCTCGCCTAA TGGTAGACGA GGATTACCAG CAAGTACTTG ATCTGTTTTG CAGAAAATCC
GCTGATTGGG CGTACGAAAG AGAGTGGCGA GTAATCCACA AGGAAGTAGG AACTGCATAT
ACATATAACT CATCCGCATT AACGGCTGTC TACTTCGGAG CGCAAATGAC AGTCCAAGAT
ATTGACATGT TATGCCTGAT TCTACATGGG CAGAATCCTG ACGTGAAGTT GTTTCGTGGA
TTCAGGAGTG AATCGGAGTA CAAGATTGAC TTTAAGCCAT TCACATATAC AACACTTCGT
GACGCAAGAG TCTCCGATTT GACATGA
|
|---|
| Protein sequence | MSERPTTLYK YEPFTLRAIQ NLKQQSLYFG PPSSFNDPYD CALTPRFKAP TDIEVCAVLA
KLISSPDTPK EIKQQLELSP IPTLKEQLVA STRFLVEKKC NEFNTSHGIS CFSEINNNLL
MWSHYGGQHR GFCLEFSTDF EPFIKIHRVT YGTDIPEVSV SRLMVDEDYQ QVLDLFCRKS
ADWAYEREWR VIHKEVGTAY TYNSSALTAV YFGAQMTVQD IDMLCLILHG QNPDVKLFRG
FRSESEYKID FKPFTYTTLR DARVSDLT
|
|---|
| |