Gene Plim_0987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0987 
Symbol 
ID9137672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1248769 
End bp1251297 
Gene Length2529 bp 
Protein Length842 aa 
Translation table11 
GC content58% 
IMG OID 
ProductSerine/threonine protein kinase-related protein 
Protein accessionYP_003629030 
Protein GI296121252 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.466827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATCAC AGCCCGCTCC TTTCCCCGCC GAGCATTCGA CCGGAAAGAG TTCGTCAGAT 
ATTGATCTGA CAACGAATTC ATCGACGACC GAAGCCCGGC AGATCTGTGA TTCGCCCTGT
CCTTCGGTCG AAGTGCTCAA GCAAGTCATG CTCGGGACAC TCGATTCGCA GCAGCAGCAG
GTCTGTATCT GCCATCTCGA TCATTGCACG GCTTGCCAGC AAGCCCTCGA ACGATTGGCC
ACTGGCGATT GCGCACTTGG CCGAAAGATG GGCCAGCTGT GCCAGCATGT CGATCAGACT
GTTCCCGAAT CGGGCTCCGC CTATTGGCCC GCTTTACGCG AGGTCGAAGT CGATCTGGCT
GAGACCTTTG TTCCAGAACT GAGCCCACTC CCCAGTTCTT TATCGGGCCT GGGGAAAGAC
AGTGCGGCCC CCACTTCGGG ATCGGGTGGA AAGCCCTCGA ACTTTTCTCA TCCCAGCCGG
GGAGATTTGA AGCTCGACTT TCTATCTCCT CCCGAAGACC CGGCCTATCT GGGGCGGCTG
TCTCACTTTG ATATCTCCCG CGTGATTGGC CGTGGCGGTA TGGGTGTGGT GCTGGAAGCG
TTTGATACGC ATCTTCAGCG CGCCGTCGCC ATTAAAGTGC TTGATCCGGA ACTCGCCTCC
AACGAGACCG CCAGACTTCG CTTCTGCCGG GAAGCTCGCG CCGCCGCCGC CATTACTCAC
GAGCATGTGG TTTCCCTACA TCATGTTGAA AAATCGGACA ATGGCGACCT GCCGTTTCTG
GTGATGCAAC TGGTTCAAGG AACCACTCTT GAAGCTCGAA TTGCCAGCGA ACACAAACTC
CCCGTCCGCG AAATCGTCAG GATCGGGATG CAGGTTGCCG CCGGTCTGGC AGCAGCTCAC
GCCGAGGGGT TGATTCATCG CGATGTCAAA CCGGCGAATA TTCTTCTGGA AGGGCCCAGT
GGACGCGTGA AGCTGACAGA CTTCGGCCTC GCCCGCTGTG TCGAAGATGT CAAACTCACG
CAGACCGGCT TCGTCACTGG CACTCCACTT TACATGGCTC CCGAACAGGC CCTGGGCGAG
GAAATCGACG AACGCTCCGA CCTCTTCAGC CTCGGTGCTG TGATGTACGA AATGGCGACG
GGTGTCCCTC CTTTTTCCGG GACGACACCA CTGGCCATCC TGCGCAAAAT CACCGAAGAA
AATGCCCGGC CCATCAGCCA GCTCAACCCG GAGATTCCCA CCTGGCTGGT CGAGATCATC
AGCAATCTGC TCAAGAGAAA TCGTAACGAT CGTTACAGTT CAGCGGCTGA AGTGGCTCAC
ATCCTCGCTT CGAAGTATCA GCAACTGGAG CACCTTTCGC CGTTACAGCT CCCGACAGTC
GCTGGCGATG CCTTCCATGA AACGTCGCTC ACCTGCCGAC AGGCCGAAAA GCGGCACGCC
CGCAATCGTC TGTTCGCACT GGCTGGCGGC ATCTTGGGAG GCATGATCCT CACACTTTCG
GCAGTCAGCT TTTACTGGTG GCAACTGGGC CTGACGACTC CCAATCCTAC GGGTGCCTCA
GCCAATTCAC CGGGTGCCAA TACAGCCTCC ATCGGTGGGC TGGATGGTGC CGGAAGTGCG
AATGAGACAA TTCCACGCGT CAAACCAGGA AGGGTCTACA CCAACAACGC CGGCCCGGTC
TGGGGCATGG AGATCACTTC GGACAACAAG CAGCTTTTCA CGGCAATAGA CGACGGCACC
ATCCGCGTCT GGAACCGTGA TCAGCATCGC ATTGCCGGCA CTGTCCAGGC ATTTGCCGGT
CAGGTCTGGG ATGTCTCAGC CTCTGAAGAT CGCAAGTTCT TCGCCGGCGG CGGAGATGAC
GGCAGCGTGA AAGTTTTTGA TCTCTCCACT CGCCAGCTGC ATGAAACCTT AAAAGCCGGT
GGCCCGGTGC GAACCTTGCA ATTCGCACCG AAAGGACATC GCCTGGCTGT GGGTACTCGA
ACAGGTCAGG TGGAAATCTG GGATGTGGAT ACCAAAGAAC GCCTCCTGAT GAACCCTGGT
CATACCAGTG GTGTCGTCTC TGTCGCCTGG TCGAATGATG GACAGTTTCT GGCGACTGGC
GGAGGAGATA AGACAGTCAA TCTGTGGGAT GCAGCCGATG GTTCTCTCCT GCTGGAAATG
ACGGGTCACA CCGGAGGCGT CTACAGCGTT GCCTTTACGG CTGATGATCA GAAGATTGTC
ACCGGAGGCT GGGATAAAAA ACTGCATGTC TGGGATGCCG CGACAGGTTC GAGCCTGGGA
GAATTGGACG GACATACGGC CGATATCTGG TCGGTGGCGT GCTCTCCTGC TGGTGCACTG
GTGGCCTCTG CCGGTGAAGA CCGGATGCTC AGACTGTGGG ATCTCGACAC CATGAAACCT
GTGGCAGTGC TGAACGATCA ATCGGGCACG ATCTACTCGG TTTGCTTCTC GGCTGACGGA
AAATCGGTCC TCACGACCGG CCGCGATGGC ATTACGCGGG AATGGAGTGT CCCCCAGACC
AGCAAATAA
 
Protein sequence
MPSQPAPFPA EHSTGKSSSD IDLTTNSSTT EARQICDSPC PSVEVLKQVM LGTLDSQQQQ 
VCICHLDHCT ACQQALERLA TGDCALGRKM GQLCQHVDQT VPESGSAYWP ALREVEVDLA
ETFVPELSPL PSSLSGLGKD SAAPTSGSGG KPSNFSHPSR GDLKLDFLSP PEDPAYLGRL
SHFDISRVIG RGGMGVVLEA FDTHLQRAVA IKVLDPELAS NETARLRFCR EARAAAAITH
EHVVSLHHVE KSDNGDLPFL VMQLVQGTTL EARIASEHKL PVREIVRIGM QVAAGLAAAH
AEGLIHRDVK PANILLEGPS GRVKLTDFGL ARCVEDVKLT QTGFVTGTPL YMAPEQALGE
EIDERSDLFS LGAVMYEMAT GVPPFSGTTP LAILRKITEE NARPISQLNP EIPTWLVEII
SNLLKRNRND RYSSAAEVAH ILASKYQQLE HLSPLQLPTV AGDAFHETSL TCRQAEKRHA
RNRLFALAGG ILGGMILTLS AVSFYWWQLG LTTPNPTGAS ANSPGANTAS IGGLDGAGSA
NETIPRVKPG RVYTNNAGPV WGMEITSDNK QLFTAIDDGT IRVWNRDQHR IAGTVQAFAG
QVWDVSASED RKFFAGGGDD GSVKVFDLST RQLHETLKAG GPVRTLQFAP KGHRLAVGTR
TGQVEIWDVD TKERLLMNPG HTSGVVSVAW SNDGQFLATG GGDKTVNLWD AADGSLLLEM
TGHTGGVYSV AFTADDQKIV TGGWDKKLHV WDAATGSSLG ELDGHTADIW SVACSPAGAL
VASAGEDRML RLWDLDTMKP VAVLNDQSGT IYSVCFSADG KSVLTTGRDG ITREWSVPQT
SK