Gene Plim_0986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0986 
Symbol 
ID9137671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp1248158 
End bp1248766 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content56% 
IMG OID 
ProductRNA polymerase sigma factor, sigma-70 family 
Protein accessionYP_003629029 
Protein GI296121251 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.544893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTTCAGA ATTCACCGAT TACACGAGTC AGCCTGCTGC TCCGCCTGAG GGATACGGCA 
GACCACTCGG CATGGCAGCA GTTTGCAGAA CTGTACGGCC CTGTCATCTA TCGCTTTGCT 
CGCGGACGTG GACTTCAGGA TGCTGACGCC GCCGATGTGA TGCAGGACAC GCTCAGGTCA 
GTTTCTAACG CAATCGGTCG TCTCGACTAC GATAGCGCGA AAGGAAGCTT CCGAGGGTGG 
CTATTTACTA TTGCCAGGAA CAAGATTTTC AACCTGCTCT CTTCGCGGAA AAACAAGCCG 
CGGGCGGCTG GTGACACAGC AGCCCACGAG TTGCTGCAAG CCACCCCTTC CGACGACAAC 
AGCCTCGAAG AGTCCTGGGA AGACGAATAT CGCCGCAGGC TGGCTGGCAT TGCGATTGAA 
CGCATCAAAG GAGAGTTCCA ACCCAACACC TGGGAAGCCT TCTGGGGGAC AGCCGTCAAC 
GGAGAATCCG CGACGGATGT GGGTGAGCGG TTGGGAATGT CCAGTGGTGC TGTCTATGTT 
GCCAAAAGTC GCGTGCTTGC CCGTCTCAAA GAGCAGGTTC AGCGGTTGAT CGATGAAGAG 
GATCAGTAG
 
Protein sequence
MLQNSPITRV SLLLRLRDTA DHSAWQQFAE LYGPVIYRFA RGRGLQDADA ADVMQDTLRS 
VSNAIGRLDY DSAKGSFRGW LFTIARNKIF NLLSSRKNKP RAAGDTAAHE LLQATPSDDN 
SLEESWEDEY RRRLAGIAIE RIKGEFQPNT WEAFWGTAVN GESATDVGER LGMSSGAVYV 
AKSRVLARLK EQVQRLIDEE DQ