Gene Plim_0981 details

Gene Information

• Locus tag: Plim_0981
• ID: 9137666
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 1242656
• End bp: 1244779
• Gene Length: 2124 bp
• Protein Length: 707 aa
• Translation table: 11
• GC content: 53%
• Product: excinuclease ABC, B subunit
• Protein accession: YP_003629024
• Protein GI: 296121246

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.14704
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCACAGT TTCAGATAGA TTCCCGTTTT CGTCCCGCAG GGGATCAACC CAAAGCGATT 
GAAGCGCTCG TCAAAGGCCT GAAGAACGAT CGAAAGAATC AGACACTGCT GGGGGTCACC 
GGTTCGGGGA AGACATTCAC CATGGCGAAT GTCATCGAGC AGCTTCAACG GCCGGCACTT 
GTGTTGTCTC ACAACAAGAC GCTGGCGGCA CAGCTTTATG CCGAGTTTAA AGAATTCTTC 
CCGCATAACG CCGTCACTTA TTTTGTGAGC TACTACGACT ACTATCAGCC GGAGGCTTAT 
ATCCCTCAGC GGGATATTTA TATCGAAAAA GACTCGTCGA TTAACGAAGA AATCGACAGG 
CTTCGTCTGC TCGCGACGAG TGCTCTGGTG AGCCGGCGGG ATGTGATTGT GGTGGCTTCT 
GTCAGTTGTA TTTACGGGCT GGGTTCTCCC AAAGATTATC TCGAAATGAT GATCCCTCTG 
CGTAAGGGGG AATCCATTGA TCGAGACGAA CTGCTCCGCA AACTTTGCGA TATCCAGTAC 
ACCCGGAATG ACCATGCACC CGAACGGGCC AACTTTCGTG TGCGGGGCGA TGTGATCGAC 
GTTTGGCCCG CTTACGAGGA ATTTGCCTAT CGCATTGAGC TGTGGGGAGA TGAGATCGAC 
AAACTCTCCA TCATTCACCC GGTAACGAGT GATGAAGTGC GCTCGTTGGA AGAGATCTAT 
ATTTATCCGG CTAAGCACTA TGTCCTCCCG GAAGATCGTG TCGCGAGTGC TGTGGCCGAG 
ATCGAAAAGG AATTAGCCGA ACAACTCGAA AAGTTCAAAA AAGAAGGCAA ACTTCTCGAA 
GCTCAACGGC TCAATGCCCG CACCCGGCAC GACCTGGAAC TTTTGCGCGA AGTTGGCTTC 
TGCCCCGGGA TCGAAAACTA TAGCCGAGCC CTTTCTGGCA GGCCGCCTGG TGAACCACCC 
TATACGCTAC TCGACTTCTT TCCTAATGAT TTCCTCACGT TTATTGATGA ATCGCATGTA 
ACAATTCCGC AGATTCGTGC GATGTTCAAT GGCGATCATG CGCGGAAAAC GACACTGGTC 
GAACACGGCT TCCGCTTGCC CATGGCTTTG GATAACAGGC CTCTCAAATT TGATGAATGG 
GAGACTCGCC GTAAGCAGGC CATTTTTGTA TCGGCCACCC CTTCCGACTG GGAATTAGAA 
CAGTCGCAAG GTGAGATTGT CGAGCAGGTG ATCCGTCCCA CCGGACTGGT CGATCCGGTC 
ATCCATATTC ATCCTTCGCG CGGGCAGGTA CAGCACTTGA TGGGGCTGAT TAAAGGACGT 
GCCGAGAAAG ACGAGCGCGT GCTGGTCACC GCCCTCACCA AGAAACTCTG CGAAGATCTG 
ACCGCTTATC TCCGCGAAGA AGGTTTACGC TGCGCCTGGC TGCATAGCGA ACTCGATGCG 
TTCGAGCGTG TCGAAATCAT TCGCGAACTG CGCGAGGGGA AATACGATAC GCTCGTGGGT 
GTGAACCTGT TGCGAGAAGG TCTTGATATT CCTGAAGTTT CGCTGGTTGC AATTCTCGAT 
GCCGATAAAG AAGGCTTCCT GCGTAGCGAA ACCAGTCTCA TTCAAACGAT TGGCCGCTCT 
GCACGAAACG TTAATGCAGA GGTCTATCTG TATGCCGATT CGGTCACGAA CAGCATGCAG 
CTGGCGATTG ATGAAACCAA CCGCCGCCGT GAACTCCAGG TGGCGTATAA CAAAAAGCAC 
GGCATCACGC CCGAAACCAT CCGCAAATCG ATCCGGCGAG GGATTGAAGA GGATGCCGAG 
GCAAACAAGA TTGTGCAGCA GGCCAGTGGC AAGTCAAGCG AGGTCGAGTA CGTCACACTG 
GAATACATTT CAGAGCTTGA AGCGGAAATG CTCAAGGCGG CGGAAAGTCT CGACTTTGAA 
CGGGCTGCTC AACTACGTGA CCGGATTCTG CAACTCAAGA AGCAGGTGGG CCAGGCGATT 
CAGGCGGATG AAGACCTGAC GACCCAGCGC GATCGGGAAC CGAAGAATCG AGGCCGGCGT 
AAAAGTCGAG GTGCCGCCGC CCGCGGAGAA GAAAAGCCCG CCCAGCGCGG GAGAGTTCCG 
AAGCCGAAGA AGTTTGGGAG TTAG 

 

Protein sequence

MPQFQIDSRF RPAGDQPKAI EALVKGLKND RKNQTLLGVT GSGKTFTMAN VIEQLQRPAL 
VLSHNKTLAA QLYAEFKEFF PHNAVTYFVS YYDYYQPEAY IPQRDIYIEK DSSINEEIDR 
LRLLATSALV SRRDVIVVAS VSCIYGLGSP KDYLEMMIPL RKGESIDRDE LLRKLCDIQY 
TRNDHAPERA NFRVRGDVID VWPAYEEFAY RIELWGDEID KLSIIHPVTS DEVRSLEEIY 
IYPAKHYVLP EDRVASAVAE IEKELAEQLE KFKKEGKLLE AQRLNARTRH DLELLREVGF 
CPGIENYSRA LSGRPPGEPP YTLLDFFPND FLTFIDESHV TIPQIRAMFN GDHARKTTLV 
EHGFRLPMAL DNRPLKFDEW ETRRKQAIFV SATPSDWELE QSQGEIVEQV IRPTGLVDPV 
IHIHPSRGQV QHLMGLIKGR AEKDERVLVT ALTKKLCEDL TAYLREEGLR CAWLHSELDA 
FERVEIIREL REGKYDTLVG VNLLREGLDI PEVSLVAILD ADKEGFLRSE TSLIQTIGRS 
ARNVNAEVYL YADSVTNSMQ LAIDETNRRR ELQVAYNKKH GITPETIRKS IRRGIEEDAE 
ANKIVQQASG KSSEVEYVTL EYISELEAEM LKAAESLDFE RAAQLRDRIL QLKKQVGQAI 
QADEDLTTQR DREPKNRGRR KSRGAAARGE EKPAQRGRVP KPKKFGS