Gene Plim_0935 details

Gene Information

• Locus tag: Plim_0935
• ID: 9137620
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 1198129
• End bp: 1200168
• Gene Length: 2040 bp
• Protein Length: 679 aa
• Translation table: 11
• GC content: 54%
• Product: ABC transporter related protein
• Protein accession: YP_003628978
• Protein GI: 296121200

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGAGCC TGAACCAACT AGCCCCTTAT CTCTGGCGTG TCCGGGGATA TCTGATTGGC 
TCATCAATCG CAGCCCTGCT GGTGGCCATT TTCTGGTCAG CCGGGCTGAT GCTCTCCTAT 
CCTCTCGTCA AAGTTCTCTT ACAAGGCCAG AGCCTGCAGG CTTATCTCAC AGAAGAAACC 
CAGAAAGCCG AAACCGAAAC AGCCCAGCAC CAGGCCGAAG CCGCCCGAGT TCAACATCAG 
CTCGACCAAC TCGACCCGAA TGTCTCATCC TCCGAAAAAA TCAGTCTGCT CAAAAGCCTC 
GACCGTGCCC AGCGGCAACT GGCCTCTTCG GGCTGGCGGC TCATGTTCTG CACCTGGCTG 
TCAAAACAAC TTTCCTCGTG GCTCCCAGAA CAGGCATTTC CCACACTCGT CCTGCTGCTC 
GCATTATTGG CAATAGTCAC GCTGGCCAAA GGTTTAACGG TTTACCTGCA GGAAAATCTG 
GTCGGTATCG CCGTCGAATC GACCATGGTC ATGCTCCGCC AGCGCATGTT CCAGCACGTT 
CTCAGGCTCG ACCATGTCAC CTTAAGTCTC CTGGGTACAC CCCAGTTGAT GGCGCGCTTC 
ACCTATGACC TGCAGCAGTT AGGGACAGGG CTCACCCTGT TCGGCGGACG TTTAATTGTC 
GAACCTTTAA AGATTCTCAG CGTGCTGATC TGCTGTTTTC TCGTGAACTG GCGATTAACA 
ACGCTTTCGC TAATCGTCGT CCCGCTGGGA GCATTACTTT TTGGCCGCTA TGGCAAGAAA 
ATCAAAAAAG CCAGCCGCAA ACAGATGGAA AGCATGTCAC GGATCTTCAC TCAACTCGAA 
GAAACACTCA GATCATTTCG CACAATTCTC GCCTTTGGTC TCGAAAGGCA AAGGCGGCAA 
AGCTTTCATC GCGAACAGAA AGTGGCCTTC GAAAAAACGA TGAAAATCCT GCGGATGGAT 
GCGCTCTCCA GCCCCACCAC AGAAATTCTC GCCACACTGG GAGCCTGCAT GGCGCTGCTT 
CCGGGAGCTT ACATGGTCCT CCGCCAGAAG TCCGAAATTT TCGGGATTCA ACTCTCCGAA 
GGGCCTCTCG ATATCGCCGA ACTGGCGTTA CTTTACACGC TCATGGGTGG CCTCCTCGAC 
CCGGCCCGCA AACTCTCTGC CGTCTATCCC AAGTTCAAAA AATCTTCCGC CGCCTGCGAT 
CGTGTCTTCA GCCTGCTGAA AACTCACACC CGTTTACAGC AGGATCGACA ATGGGTGCCA 
TTACCTCGCC ACACCGACAA GATTGAGTTC GAGAACATCA CCTATACTCA CCCCGTCGCC 
GAAGACCGCA ATCAGGCACG TCCGCCGGCT CTTGACCGAG TCTCCCTGAG GATTGCCTTC 
GGCGAAACCG TGGCCATTGT CGGCGGGAAC GGCTCTGGAA AATCTACACT CATCAACCTG 
CTCCCCAGGC TCTACGACCC GGATTTCGGC ATCCTGCGCA TTGACGGAAT TGATATTCGC 
CACACTCAGT TGGCACTGTT ACGAAAACAG ATTGCCGTGG TCCCTCAGGA AACACAGCTC 
TTCAACCGCA CCATCTCCGA AAACCTGCGC TATGGCAGTT GGGATGCTCC CGCTGACCGC 
GTGACTCGAC TGGCACATGA TTTTGCCGTC GATTCCTTTG CCAGTCGTTT CCCCGATGGT 
CTCGAAACTT CCGTCGGCGA GCGGGGTCAA CGGCTTTCCG GTGGTCAAAG ACAACGCATC 
GCCCTCGTAA GAGCACTCCT GCGCGATCCT GCCATTCTCA TTCTCGATGA AGCCACATCA 
GCCATTGATC GCGAAAGCGA AACACAGATT TACGAAGCAC TCGCCCACCA CAAGCAGAAC 
CGCACCGTGC TGATTGTCAC ACACTCTTTG ACAGACACAC TGCTCAAAAT CGTCGATCGA 
GTGGTGGTGA TGGATCATGG TCAGATCATC GCACATGGCG AACATACCCA ACTGTTGAAG 
ACCTGCCCGA TCTATCGAAA TTTGTTTGCC GCCCAGCGCG AACAAGCCCA CGCCGCCTGA 

 

Protein sequence

MESLNQLAPY LWRVRGYLIG SSIAALLVAI FWSAGLMLSY PLVKVLLQGQ SLQAYLTEET 
QKAETETAQH QAEAARVQHQ LDQLDPNVSS SEKISLLKSL DRAQRQLASS GWRLMFCTWL 
SKQLSSWLPE QAFPTLVLLL ALLAIVTLAK GLTVYLQENL VGIAVESTMV MLRQRMFQHV 
LRLDHVTLSL LGTPQLMARF TYDLQQLGTG LTLFGGRLIV EPLKILSVLI CCFLVNWRLT 
TLSLIVVPLG ALLFGRYGKK IKKASRKQME SMSRIFTQLE ETLRSFRTIL AFGLERQRRQ 
SFHREQKVAF EKTMKILRMD ALSSPTTEIL ATLGACMALL PGAYMVLRQK SEIFGIQLSE 
GPLDIAELAL LYTLMGGLLD PARKLSAVYP KFKKSSAACD RVFSLLKTHT RLQQDRQWVP 
LPRHTDKIEF ENITYTHPVA EDRNQARPPA LDRVSLRIAF GETVAIVGGN GSGKSTLINL 
LPRLYDPDFG ILRIDGIDIR HTQLALLRKQ IAVVPQETQL FNRTISENLR YGSWDAPADR 
VTRLAHDFAV DSFASRFPDG LETSVGERGQ RLSGGQRQRI ALVRALLRDP AILILDEATS 
AIDRESETQI YEALAHHKQN RTVLIVTHSL TDTLLKIVDR VVVMDHGQII AHGEHTQLLK 
TCPIYRNLFA AQREQAHAA