| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0924 |
|---|
| Symbol | |
|---|
| ID | 9137609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 1181834 |
|---|
| End bp | 1183165 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | FAD-dependent pyridine nucleotide-disulfide oxidoreductase |
|---|
| Protein accession | YP_003628967 |
|---|
| Protein GI | 296121189 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.848409 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTTT CTGGTAAGCA TCGCGTGGTG ATTGTCGGCG GCGGATTTGG AGGCCTGACC
ACGGCCAAAG CTCTGCGGAA AACCCCGGTT GATATTACGC TAGTGGATCG ACGGAATTTT
CATCTCTTTC AGCCGCTGCT TTATCAAGTG GCTACGGGAG GGTTATCTCC CGGAAATATT
GCCGCCCCTT TGCGATCGAT TTTTGCGAGG CAAAGAAATG TCCATGTGGT CATGGATGAA
GTGATCGGGT TTGACCTGCC GAGGCGGCGG GTTCTGCTCC AGGAAGGAGA ACTCGCATTT
GATTCGCTGG TGGTGGCTGC GGGTGCGAAG ACAGGCTACT TCGGCAATGA TCAATGGGCC
GAAAATGCCC CGGGTCTGAA AACTGTCGAG GATGCCATCG AGATCCGCGG GCGTGTCCTG
ACGGCTTTTG AAGAGGCCGA TAAGCTGCCG ACGCCTCAGG CCCGCGAACA TCTGCTGACG
TTTGTGGTGG TGGGTGCCGG CCCGACGGGT GTTGAACTGG CGGGAACTCT CGCTGAAATT
GCCCGCCATA CACTCCGGCA TGATTTCCGC ATTATTAATC CTGCCGAGAC CCGCATCATT
CTGATCGATG CGGCCCCGCG CATTCTCATG GCGTATGCCG AAGACCTTGC GCTGAATGCG
CAAAAGAAAC TGATGGACAT GGGTGTGGAA GTCCGCACGC AGGTCAAAAT TCAAAAAGTG
GATGCCTCGG GTGTAGAAGT GATGACGGCA CAGGGAGTCG AACAGATCGC TGCGGCGAAT
GTCCTTTGGG CGGCGGGTGT GACGGCTTCA CCACTTGCAA AATTGCTTTC GGAAGCCACT
GGTGCGCCAC TCGATCGTCA AGGACGGATT GAAGTTCAAA GCGATCTCAC GCTGCCGGGA
CATCCTCAAG TTTATGTGAT TGGGGATATG GCCCATTTCA AACTTCCCAG TGGGCAGGCC
GTTCCTGGTG TGGCTCCGGC GGCAATGCAG CAGGGGAAAT ATGTGGCTAA AGCGATTCAA
TCGCGCTTTC AAAACGTTTC TTTATCACCG TTCACCTATA CCGATCTGGG GAGCATGGCC
ACGATTGGCC GGAAGGCAGC GATCGCGCAG ATTGGAACAT GGAAGTTCAC AGGACTCATT
GCCTGGATCC TGTGGCTGTT TATTCATCTG ATTCAAATCG TCAGCTTTGA AAGCCGTATT
CTGGTGCTGA TTCAATGGGC GTGGAACTAT CTCACATTCA GTCGTTCGGC CCGGTTGATT
ACGCAAAGTG GCTATACCCA CGGCGGACAT CTGCGAACCA CCCATGTCAC AAATTCGGCG
GATAACAGTT AG
|
|---|
| Protein sequence | MSLSGKHRVV IVGGGFGGLT TAKALRKTPV DITLVDRRNF HLFQPLLYQV ATGGLSPGNI
AAPLRSIFAR QRNVHVVMDE VIGFDLPRRR VLLQEGELAF DSLVVAAGAK TGYFGNDQWA
ENAPGLKTVE DAIEIRGRVL TAFEEADKLP TPQAREHLLT FVVVGAGPTG VELAGTLAEI
ARHTLRHDFR IINPAETRII LIDAAPRILM AYAEDLALNA QKKLMDMGVE VRTQVKIQKV
DASGVEVMTA QGVEQIAAAN VLWAAGVTAS PLAKLLSEAT GAPLDRQGRI EVQSDLTLPG
HPQVYVIGDM AHFKLPSGQA VPGVAPAAMQ QGKYVAKAIQ SRFQNVSLSP FTYTDLGSMA
TIGRKAAIAQ IGTWKFTGLI AWILWLFIHL IQIVSFESRI LVLIQWAWNY LTFSRSARLI
TQSGYTHGGH LRTTHVTNSA DNS
|
|---|
| |