Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0915 |
Symbol | |
ID | 9137600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 1172138 |
End bp | 1174900 |
Gene Length | 2763 bp |
Protein Length | 920 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | peptidase S9 prolyl oligopeptidase active site domain protein |
Protein accession | YP_003628958 |
Protein GI | 296121180 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.24232 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTCAAG TTTTCCGTGC TGTCTTTCAG TTTCGATACT CGTTCATCGT TCTGAGCCTG TGTGCCAGTC TGGCTGGAGG CATTTCTCCA GCAACTCTTT GGGCCGATGA TGGTGAAGCT GTGAGCCCCA GTGGCTACAA GCTGCCGCCC AAAGAAATGG TCGAGATCAT TGATGCGCCA CTTCCTTCGC AGTTATTGCT CTCGCCGAAC CATCAGAAGT TTGTGCTGAT TGATCGGACT CCGTGGCCAT CGATTGAGTT CTTCGCCCGC CCCTTCCTGA AGCTGGCCAG TTTGCGTGTG GATCCTGAAC TTTCAGTTCA AAGGCGAACA GCCGAGTATT TTCGGATTTC ACTGAGTTCG CTGCCACCCA AGACTGAACC GGTGGTGCTT GTCGAACAGA AGGGGTTATC GACGCCGATC TGGTCACCAG CCGGTGATCG ACTGGCCTAC ACGGTCGATA CAACGGGTGG GATGGAGTTG TGGGTTGTCG ATGTGAATGC TCCCCAGCCT GTCCCTCGCC AGGTGCCGGG AGTTCTGCTG ACTGACATTG CGGGTTCGCC ATTTCGCTGG ATCAATAACG GGAAAGAACT GCTTGTCCGG CAGATTCCAC CTGCTCGCGG CGCTATGCCT GTCGAACCGA CCCAGCCGAC AGGTCCGATT GTGCAATCGA CGTCTGGTCA GAAAACGAAA GCCAGAACCT ATCAGGACTT GCTGAAGACC CCTTACGACG AAACGCTCTT CGACTACTTT GCGACGGTGC AACTGGCTCG TGTTGATGCG TCAACGCTGG AAATCATTCC TGTAGGCCAG CCGGGATTAT ATACCTCGGC TTCCGTCTCG CCTGATGGTA GTGCCATGGT GGTGACAAAA CTGAAAAGGC CGTTTTCCTA TCGAGTTCCC TATAGTCAAT TCCCTCGAAC AGTCGAGGTG GTTGATCTCA AAACAGGTGC CACGCTACGT ACGCTCAGTG ATATCAAGTC GCCACAGTTC TCGTCGAGTT ATGGCGTGAG TGCGGGTGGC CGCATGTTCG AATGGGATCC TCATCACCCT GCTAAACTTT ATTGGGTCGA GACTCTCGAT GGTGGAAATG CAGAAGCCAA ATCGAAGTTT CGCGATCGAC TGGTCACGCT GTCGACTCCT TTCAGTGGGC CGATTGCAGA AGTCCTGCAA ACAGCCGAGC GGCTCAATGA TCTGGATTTT ACAACGACTC CTGATGAAGT TCTGATTACC GAAGTTAATA CGATCCGTCG GTGGAAAACA ACAGCGGTCT TGAATCTGGC CGACCCAATT GCGAGCCGAC GGGTGCTCTT TAATCTTTCG ACGAGTGATG CTTACGCCGA CCCTGGTAAA CCCGTGCGAA CTCGGACGGT GGATGGGCAA AGCGTCATCC TCAAGCAGGG GACGACCTTC TTCATGGAGG GAACAGGGAG TTCACCCGAA GGGGATTATC CATTCCTTGA TCAGATTGAT CTGGCGACTG GCCAACGATC ACGGCTGTTC CGATCTCAGC GGGGAACTTA TGAAACTTTT GTAGCATTCA CCGATGAGAC TCAGCGAACG ATACTTACTC AGTTTCAGAG CCCCACGACT CCACCGAACT ATTTACTAAA ACAACTTCCG CTTCGCCGGG AGGAAGTGGA GACAGCGGGA GAAGCTGCTG CAGTGAGTGC GCTGGCGCCT GTCAAATTTG ATACAGGCGG TCGGTCGCTG GATCCCATTG TTGGGGCTGC AAAGCCTGAG TTCCCCGTGG GTGGGGAATT GCTGGGAGCC GTCACGAAGT TTAATGATCC GCATCCGCAG TTTACTTCGT GTTCGAAAGA ACTCCTGACG TATCAGCGGG GTGACGGTGT GCCCCTGTCG GCTACGCTTT ATCTTCCGCC GGGTTATGAC CGTACCTCGG GGAAAAAACT CCCGGTGATC ATGTATGCCT ATCCGCGTGA ATATTCTGAT GTCCAGACAG CCGGCCAGGT GCGAGGCTCT CCTCATAAGT TTACCCGCTT ATGGGGTGCC AGCCCTTTAA TGTTTTTAAC TCAGGGTTAT GCGATCATGA TGGATACGGC GATGCCGATT ATTGGTTCGC CCCGCAAGAT GAACGATACT TATGTTGAGC AGTTGGTGGC AGATGCCGAG GCGGCTGTGA AAGTGGTCAC AGATCTGGGC GTGGGTGATC CTGATCGAAT CCTTGTCACG GGTCATAGCT ATGGTGCATT CATGACTGCC AACCTGCTGG CCCATACTGA TCTTTTTGCG ACGGGTATTG CCTGCAGTGG AGCTTATAAC CGGACGTTGA CTCCCTTCGG TTTTCAGAAC GAGCCGCGAA CATTCTGGGA AGCACCTACG GTCTATGCGA GGATGTCGCC GTTCTTTCAT GCCAACCGCG TGCGTGAACC GATCATGCTG ATCCACGGGC AGGAAGATCA GAACTCGGGG ACATTCCCCA TGCAATCCGA ACGCTTTTAT GAAGCTCTGG CTGCCAATGG TGCAACTGCA CGGTTAGTGC TGCTCCCTCA TGAGGGTCAT GGATATCTCT CGCGGGAATC GATCCTGCAT CAACTGGCGG AGATGACGGC CTGGGCGGAT CGATATGCCA AGAATGGAAA GAGAATCAAA CCGAGCGAGA ACAAATCGCC GGGCAATAAT GTGCCTGCGA ATGGAGATGC TGCCGCAGCC AGTGCTAAGG CCTCGGATCC GGTTTCAACG GGCAAAGCAC CTACTGCCGA TCGTGACGCG ACGGAAGGAG TGGTGGACGA GATTGAGCCA TAA
|
Protein sequence | MRQVFRAVFQ FRYSFIVLSL CASLAGGISP ATLWADDGEA VSPSGYKLPP KEMVEIIDAP LPSQLLLSPN HQKFVLIDRT PWPSIEFFAR PFLKLASLRV DPELSVQRRT AEYFRISLSS LPPKTEPVVL VEQKGLSTPI WSPAGDRLAY TVDTTGGMEL WVVDVNAPQP VPRQVPGVLL TDIAGSPFRW INNGKELLVR QIPPARGAMP VEPTQPTGPI VQSTSGQKTK ARTYQDLLKT PYDETLFDYF ATVQLARVDA STLEIIPVGQ PGLYTSASVS PDGSAMVVTK LKRPFSYRVP YSQFPRTVEV VDLKTGATLR TLSDIKSPQF SSSYGVSAGG RMFEWDPHHP AKLYWVETLD GGNAEAKSKF RDRLVTLSTP FSGPIAEVLQ TAERLNDLDF TTTPDEVLIT EVNTIRRWKT TAVLNLADPI ASRRVLFNLS TSDAYADPGK PVRTRTVDGQ SVILKQGTTF FMEGTGSSPE GDYPFLDQID LATGQRSRLF RSQRGTYETF VAFTDETQRT ILTQFQSPTT PPNYLLKQLP LRREEVETAG EAAAVSALAP VKFDTGGRSL DPIVGAAKPE FPVGGELLGA VTKFNDPHPQ FTSCSKELLT YQRGDGVPLS ATLYLPPGYD RTSGKKLPVI MYAYPREYSD VQTAGQVRGS PHKFTRLWGA SPLMFLTQGY AIMMDTAMPI IGSPRKMNDT YVEQLVADAE AAVKVVTDLG VGDPDRILVT GHSYGAFMTA NLLAHTDLFA TGIACSGAYN RTLTPFGFQN EPRTFWEAPT VYARMSPFFH ANRVREPIML IHGQEDQNSG TFPMQSERFY EALAANGATA RLVLLPHEGH GYLSRESILH QLAEMTAWAD RYAKNGKRIK PSENKSPGNN VPANGDAAAA SAKASDPVST GKAPTADRDA TEGVVDEIEP
|
| |