Gene Plim_0908 details

Gene Information

• Locus tag: Plim_0908
• ID: 9137593
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 1162841
• End bp: 1164952
• Gene Length: 2112 bp
• Protein Length: 703 aa
• Translation table: 11
• GC content: 57%
• Product: DEAD/DEAH box helicase domain protein
• Protein accession: YP_003628951
• Protein GI: 296121173

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCAGAAC TTTCCCCCTC GACTCCTGTG GAATTTTTAC GCACCGTGGG GCCGCAACGA 
GCGGCTTTAC TGGCGAAGCT CGACATTTTA ACTGTCGAAG ATCTCCTCTT GTGGATGCCG 
CGTGATGTAC TGGATTTGAC CAGAACCACC CGCATCGAAG GATTGATTGA AGGCACGACA 
CAGACTCTCC GCGGCATAGT CGTCGACCGC GATAGCCGGA TCTCCCGTGG CCGCAGCATG 
GTAGGCATCC TGCTCAAAGC CGATGGTGGC TATTTGCGCT GCGTCTGGTT CAATCAGCCC 
TATGTCTTTC GGAAGTATGA ACCCGATAGC GTCCTCCTGG TGACAGGCCA GCCGAAACTT 
CGCGATGGAC GGTGGGAAAT GTCTCATCCG CTTGTCCAGC GGCTGGAATC GGACGATGAA 
CAGGCTGGCC CCGGCATTCT GCCGCGATAT CCCTTAACTG AAGGGATCTC CATGCACGAA 
ATGCGACGGA TGACCAGAGC CGCCGTCGAA GAATGTGCCC ACCTGTTGAC CGACCCGATT 
CCCGCCAGCT TTCGCCAGGT TCATCAATGG CCGGCTCGCA GCGAGGCTTG CCGTGGCCTC 
CATGTGGCGC AATCTCTCGA AGAGTACGAA CGTTCCCGCA AGCGTTTGCT GCTCGAAGAT 
CTCCTCGAAT TTCAATTGGG GCTGGCACTG CGCCGGCGCA TGAGAATTGA ACAGCAGGAG 
GCGATTGCCT TACCCGCTGA TCAACGCATT CGCGCTCGCA TTGCCCGCCT GTTCCCCTTT 
GAATGGACGA ACGGACAAAA TGAGGCTCTC GAAGAGATTC TCACAGATCT TGAGAAAACG 
CGGCCCATGC ATCGACTCCT TCAAGCCGAC GTCGGCGCGG GAAAAACGGC TGTGGCCATT 
GCAGCCATGC TGGTCGCTGT GGCCAACCGC ATGCAGGCCA TACTGATGGC GCCGACAGAG 
ATTCTCGCCA GGCAGCATTT TGAAACGCTC GAAGAGTTGC TCGCCGAAAG CCAGGTCGAG 
CGTCGCCTGT TGACAGGTTC TTTGACGGCT GCTCAAAAAC GCACAACCCT TTCGGAAATC 
GAAGAGGGCT CAGCACAATT GATTGTCGGT ACGCAGTCAC TCATTCAGGA AGGTGTCAAA 
TTTTCAAAGC CCGGACTGGT CGTGATCGAT GAGCAGCATA AGTTCGGCGT CGAGCAGCGT 
GCGCGTTTTG CCCAGGGCTC AACCATCCCG CACATGCTGG TCATGACTGC GACGCCCATC 
CCTCGCACAC TGTGCCTGAC TGCGTTTGGC GATCTGGATT TATCCATCAT TCGCGAGCTG 
CCTCCCGGGC GACAACCCGT TTCCACGCAT GTCGTGACCG ATGCACCCAG TGCCCGTAAA 
GCCTGGGATT TTCTCAAAAG CAAACTGACG GAAGGTCGAC AGGCTTACGT GATTTGCCCC 
AAAGTGGAAA CGACCCGCAG TTCCGAACAA GCGTCGTCGC CACAGATTGT TCAAGCCGCT 
CCTCAGACCT GGGAAAGCGC CGAGGACCTG TACCAGCGTT TGCAATCCAA AGAGCTGGCT 
CAGTTTCGGG TGGGGCTCTT GCACGGCCGG ATGTCCCCCG AGTTACGAGC CGAAACCATG 
CGGAAGTTTC GTGAACATGA ACTGGATGTG CTCGTGGCCA CCAGCGTGAT TGAAGTGGGT 
GTGGATGTCC CTTCCGCAAC GCAGATGATT GTCTATCATG CCGAACAGTT TGGCCTATCG 
CAGCTGCATC AGTTTCGCGG GCGTGTCGGA CGTGGTTCGA GGCAGGGGTT CTGTTTTCTG 
TTCACGAAGT CGACCGACCC CGATGCCCTT TCCCGCCTCA AGACACTCGA ACAGACCAAC 
GATGGATTCG CTGTGGCGGA AGCCGACTTT CAGCTTCGCG GACATGGCGA TGTTCTGGGA 
ACCCGGCAAC ATGGCCAGAC CCCACTCAAA AGGGCCAATC TCATCCGTGA TGCACAACTC 
GTCGAAACGG CCCGGGCTCT GGCCACGTCA CTCATTGATT CCGGGCAGTT CGATACCCCC 
GAATTCTTGA CGCTCAGGCG TTTGGTTCAC GAACGCTTCA ACAAACTCGA AGAGACCACC 
CAATCCGGTT GA 

 

Protein sequence

MAELSPSTPV EFLRTVGPQR AALLAKLDIL TVEDLLLWMP RDVLDLTRTT RIEGLIEGTT 
QTLRGIVVDR DSRISRGRSM VGILLKADGG YLRCVWFNQP YVFRKYEPDS VLLVTGQPKL 
RDGRWEMSHP LVQRLESDDE QAGPGILPRY PLTEGISMHE MRRMTRAAVE ECAHLLTDPI 
PASFRQVHQW PARSEACRGL HVAQSLEEYE RSRKRLLLED LLEFQLGLAL RRRMRIEQQE 
AIALPADQRI RARIARLFPF EWTNGQNEAL EEILTDLEKT RPMHRLLQAD VGAGKTAVAI 
AAMLVAVANR MQAILMAPTE ILARQHFETL EELLAESQVE RRLLTGSLTA AQKRTTLSEI 
EEGSAQLIVG TQSLIQEGVK FSKPGLVVID EQHKFGVEQR ARFAQGSTIP HMLVMTATPI 
PRTLCLTAFG DLDLSIIREL PPGRQPVSTH VVTDAPSARK AWDFLKSKLT EGRQAYVICP 
KVETTRSSEQ ASSPQIVQAA PQTWESAEDL YQRLQSKELA QFRVGLLHGR MSPELRAETM 
RKFREHELDV LVATSVIEVG VDVPSATQMI VYHAEQFGLS QLHQFRGRVG RGSRQGFCFL 
FTKSTDPDAL SRLKTLEQTN DGFAVAEADF QLRGHGDVLG TRQHGQTPLK RANLIRDAQL 
VETARALATS LIDSGQFDTP EFLTLRRLVH ERFNKLEETT QSG