Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0892 |
Symbol | |
ID | 9137577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 1140844 |
End bp | 1142379 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | phosphate-selective porin O and P |
Protein accession | YP_003628935 |
Protein GI | 296121157 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCTTGC CGACCCGATG TCGAGTGCTG GTATTGGCAA TTTCTGCCAC TCTAGGAATC TCGGGGTTCG CACAGGAGAG CTCCTTGCCT CCAGAACCTC CCGCTGTGAC CGAGGGCAAG GTTCGTCTCG ATGAATCGGA AACAAATCCT TCGCTTCCTG CCAATCCTGC GCCAGGCTCC TACGACGAAC TGCTGAAGCG TCTGGAAAAA AACGAACAGG AAATCGCCCG GCTGAACAGC GAGTTAAGTT CCAACGTCGA CAATGACCGC TCGTTCCGCG ATGTCTTTGA GGAACGCTGG AGCAAGGTTC AAGACCCTTC GATTACAACC GTCGATGAGC AGACCTATAC TCCCGGAGGA TCAAAACCCA AGCAGTGGTA CGACCGCCTG AGCATCAGGG GTTATGCCCA GTTTCGATAC AACTTCGTGG TCGATGAAGA CGGCGCACCG GCTCAACTCA TTGGCGACCG CTCGGTCAGT GATGATCAGT CATTTCTCAT TCGACGGGCA CGACTGATCA TCTCAGGCGA TGTCTCCGAG AATCTGTATG TCTATCTTCA AACCGATTTC GCCTCCACGG TGCCGGATAG TGACGATTCG ACCTACTATG CACAGATCCG CGACTGGTAT GGCGATCTGT ACTTCGATGA GGATAAAGTT CACCGCGTTC GTATCGGACA GTCCAAAGTC CCTTACGGCT GGGAAGACCT CCAATCCAGT TCCAACCGGG CTCCCCTGGA TCGCAGCGAC AGCATTAACT CAGCGACCAG AAACGAGCGC GATCTGGGTG TCGTCTACTA CTGGACACCT GAAGGAGCTC AGGACCTTTT CAAAGAAGTT CTCGATCGAG GTCTCAAAGG TTCTGGAAAC TACGGTGTCT TCGGCATTGG GGCTTTTAAC GGTCAAGGGG GCTCGACTCT CGAAGAAAAT GACAACCTGC ACCTTTACAC ACGACTGTCT GTCCCTCATA AGCTCGATAA CGGCCAGATT CTCGAAATGG GCGTACAGGC CTACACCGGA AAGTATGTCG TGGGCTCTGC TCCCATTCGA CCATTAGGTG TGCCCCCCGC CATGATCCCC GCGGGCACCA TTGGAGCCGG AGATGATGGT GGCATTGTCG ATCAGCGCCT GGCAGGGACG TTCGTCTGGT ATCCTCAACC CTGGGGCTTG CAGGCCGAGT GGAATATTGG CAATGGCCCC GGCCTCAATG ACGAGCAGAC GGCTGTCGTC AAACGCTCAT TGACTGGTGG CTATGTCATG GCCTTATACC GTCTGGAAAC CGAGTCACAC GGCACCATCT TCCCTTTTGG TCGCTACACC TATTATCAGG GTGGACTCAA GAATTTCGCC AACGCCCCCT ACGGCACGAT CAACGAATGG GAACTGGGTT TCGAGTGGCA GATCAATCCG CAGATGGAAT TTTCTACTCA GTACACGATA GCCGATCGTA CAAATGTCTC GGCTCGCTCC TCAGGAACAT CTTATGGACA ATTCCGCGGA GATATCATTC GCTGTCAGTT CCAGATTAAC TATTAA
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Protein sequence | MPLPTRCRVL VLAISATLGI SGFAQESSLP PEPPAVTEGK VRLDESETNP SLPANPAPGS YDELLKRLEK NEQEIARLNS ELSSNVDNDR SFRDVFEERW SKVQDPSITT VDEQTYTPGG SKPKQWYDRL SIRGYAQFRY NFVVDEDGAP AQLIGDRSVS DDQSFLIRRA RLIISGDVSE NLYVYLQTDF ASTVPDSDDS TYYAQIRDWY GDLYFDEDKV HRVRIGQSKV PYGWEDLQSS SNRAPLDRSD SINSATRNER DLGVVYYWTP EGAQDLFKEV LDRGLKGSGN YGVFGIGAFN GQGGSTLEEN DNLHLYTRLS VPHKLDNGQI LEMGVQAYTG KYVVGSAPIR PLGVPPAMIP AGTIGAGDDG GIVDQRLAGT FVWYPQPWGL QAEWNIGNGP GLNDEQTAVV KRSLTGGYVM ALYRLETESH GTIFPFGRYT YYQGGLKNFA NAPYGTINEW ELGFEWQINP QMEFSTQYTI ADRTNVSARS SGTSYGQFRG DIIRCQFQIN Y
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