Gene Plim_0892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0892 
Symbol 
ID9137577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1140844 
End bp1142379 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content54% 
IMG OID 
Productphosphate-selective porin O and P 
Protein accessionYP_003628935 
Protein GI296121157 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCTTGC CGACCCGATG TCGAGTGCTG GTATTGGCAA TTTCTGCCAC TCTAGGAATC 
TCGGGGTTCG CACAGGAGAG CTCCTTGCCT CCAGAACCTC CCGCTGTGAC CGAGGGCAAG
GTTCGTCTCG ATGAATCGGA AACAAATCCT TCGCTTCCTG CCAATCCTGC GCCAGGCTCC
TACGACGAAC TGCTGAAGCG TCTGGAAAAA AACGAACAGG AAATCGCCCG GCTGAACAGC
GAGTTAAGTT CCAACGTCGA CAATGACCGC TCGTTCCGCG ATGTCTTTGA GGAACGCTGG
AGCAAGGTTC AAGACCCTTC GATTACAACC GTCGATGAGC AGACCTATAC TCCCGGAGGA
TCAAAACCCA AGCAGTGGTA CGACCGCCTG AGCATCAGGG GTTATGCCCA GTTTCGATAC
AACTTCGTGG TCGATGAAGA CGGCGCACCG GCTCAACTCA TTGGCGACCG CTCGGTCAGT
GATGATCAGT CATTTCTCAT TCGACGGGCA CGACTGATCA TCTCAGGCGA TGTCTCCGAG
AATCTGTATG TCTATCTTCA AACCGATTTC GCCTCCACGG TGCCGGATAG TGACGATTCG
ACCTACTATG CACAGATCCG CGACTGGTAT GGCGATCTGT ACTTCGATGA GGATAAAGTT
CACCGCGTTC GTATCGGACA GTCCAAAGTC CCTTACGGCT GGGAAGACCT CCAATCCAGT
TCCAACCGGG CTCCCCTGGA TCGCAGCGAC AGCATTAACT CAGCGACCAG AAACGAGCGC
GATCTGGGTG TCGTCTACTA CTGGACACCT GAAGGAGCTC AGGACCTTTT CAAAGAAGTT
CTCGATCGAG GTCTCAAAGG TTCTGGAAAC TACGGTGTCT TCGGCATTGG GGCTTTTAAC
GGTCAAGGGG GCTCGACTCT CGAAGAAAAT GACAACCTGC ACCTTTACAC ACGACTGTCT
GTCCCTCATA AGCTCGATAA CGGCCAGATT CTCGAAATGG GCGTACAGGC CTACACCGGA
AAGTATGTCG TGGGCTCTGC TCCCATTCGA CCATTAGGTG TGCCCCCCGC CATGATCCCC
GCGGGCACCA TTGGAGCCGG AGATGATGGT GGCATTGTCG ATCAGCGCCT GGCAGGGACG
TTCGTCTGGT ATCCTCAACC CTGGGGCTTG CAGGCCGAGT GGAATATTGG CAATGGCCCC
GGCCTCAATG ACGAGCAGAC GGCTGTCGTC AAACGCTCAT TGACTGGTGG CTATGTCATG
GCCTTATACC GTCTGGAAAC CGAGTCACAC GGCACCATCT TCCCTTTTGG TCGCTACACC
TATTATCAGG GTGGACTCAA GAATTTCGCC AACGCCCCCT ACGGCACGAT CAACGAATGG
GAACTGGGTT TCGAGTGGCA GATCAATCCG CAGATGGAAT TTTCTACTCA GTACACGATA
GCCGATCGTA CAAATGTCTC GGCTCGCTCC TCAGGAACAT CTTATGGACA ATTCCGCGGA
GATATCATTC GCTGTCAGTT CCAGATTAAC TATTAA
 
Protein sequence
MPLPTRCRVL VLAISATLGI SGFAQESSLP PEPPAVTEGK VRLDESETNP SLPANPAPGS 
YDELLKRLEK NEQEIARLNS ELSSNVDNDR SFRDVFEERW SKVQDPSITT VDEQTYTPGG
SKPKQWYDRL SIRGYAQFRY NFVVDEDGAP AQLIGDRSVS DDQSFLIRRA RLIISGDVSE
NLYVYLQTDF ASTVPDSDDS TYYAQIRDWY GDLYFDEDKV HRVRIGQSKV PYGWEDLQSS
SNRAPLDRSD SINSATRNER DLGVVYYWTP EGAQDLFKEV LDRGLKGSGN YGVFGIGAFN
GQGGSTLEEN DNLHLYTRLS VPHKLDNGQI LEMGVQAYTG KYVVGSAPIR PLGVPPAMIP
AGTIGAGDDG GIVDQRLAGT FVWYPQPWGL QAEWNIGNGP GLNDEQTAVV KRSLTGGYVM
ALYRLETESH GTIFPFGRYT YYQGGLKNFA NAPYGTINEW ELGFEWQINP QMEFSTQYTI
ADRTNVSARS SGTSYGQFRG DIIRCQFQIN Y