| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0887 |
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| Symbol | |
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| ID | 9137572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 1133798 |
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| End bp | 1135471 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | thiamine pyrophosphate protein TPP binding domain protein |
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| Protein accession | YP_003628930 |
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| Protein GI | 296121152 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCAACTC ATGCTCACGG AACAAGCACC ACTGCTTCTA TAGAGACAAA CCCCACCATT
GGCGATTACC TGATCCGCCG TCTGCTCGAT TACGGCATGA AGGACATCTT TGGCATCCCT
GGCGACTTTG TCCTGCAGTT TTACGGCGAT CTCGAAAACA GTCCCATTCG TGTCATTGGT
TGCACGCGCG AAGACAATGC CGGGTATGCC GCCGACGGTT ATGCCCGCAT TCATGGCATT
GGTGGAATTT GTGTGACCTA TTGCGTGGGC GGATTGAGCG TTTGTAATTC TGTCGCCGGG
GCCTTTGCAG AAAAGTCACC CGTCGTCGTC ATCACCGGCT CGCCAGGAGT CGAAGAGCGA
CGCTCGAACC CGCTGTTACA TCATCGCGTG CGGGAATTCA GCACTCAGCG CGAAGTCTTT
GAAAAGATTA CGATCGCTTC GACAGTCCTC GACGATGCCC TGACGGCTTG CCGGGAAATC
GATCGCGTGC TCGAAGCCTG CGTCCGATTC AAGCGGCCGG TTTACATCGA ATTGCCGCGC
GACATGATCA AGGTCCGTTG TCCTTATCAG CATGTGCCTC AGGCCGGAAC CATCAAAAGC
GATAAAGCCG CCCTCAAGGA GGCCTTGAGC GAAGCGGGAG CCATGCTCGC CAAAGCGGAG
CGGCCCATTA TTCTCGCCGG TGTCGAAATG CACCGCTTCG GACTGGCGGA TGAACTGATC
CACTTTGCGG AAAAGTTTGA GATTCCGATC TCTGCCACCT TGCTGGGGAA ATCGGTCATC
AGTGAAAAAC ATCCCCTCTT TATTGGCATT TACGAAGGGG CCATGTGCCG GGAATCGGTG
CGAAAGTATG TCGAACAGAG CGATTGTATC GTCATGCTCG GAACGTTCAT GACAGATATC
GATATGGGGA TTTTTACTGC CGAACTCGAC ACATCCAAAA CTATTTATGC GACAAGTGAA
ACCCTCAAGA TATCCCATCA CCATTTCCAT GACATTCTGG TGGCCGACTT TGTCAAAGGC
CTTTCCAAAC TCGATGTCAA AATCGCCAAA AGGCCTTTAC CACCGAAGGC CAAGCCGACG
CCCAAATTTG TGGCGGTCCC CGAAACCGCT GTGACAAGTG CCCGGCTCTT CGCGCGGATC
AACGAGCTCC TCGATGAAAA AATGGTCGTC GTGGCGGATG TGGGCGATTG CCTGTTTGGC
GCGGCCGATT TGACCATCTA CCGCGATACC GAGTTCCTGA GCCCGGCTTA CTACACTTCG
ATGGGCTTTG CCATCCCGGC CGCCTTAGGT GTCCAGGTCG CCCGCAAAGA TCTCCGACCG
ATTGTTCTCG TAGGCGATGG CGCCTTTCAG ATGACCTGCC TCGAACTCTC AACTGTCCTG
CGGCACAATT TCAATCCCAT CGTCATCGTG CTCAACAACA AAGGTTACAC CACCGAGCGA
TTCATTCAGG ATGGCCCCTT CAACGATATT CTCAACTGGG ACTATCATCG GCTGCCCGAT
CTCCTCGGCG GCGGCTGGGG ATTCGAAGTC CGCACAGAAG GCGAACTGGA TCAATCGTTG
CATGCCGCTC TCAGCAACAA AGAAACGTTC TGCCTCCTCA ACGTACACCT CGATCCACTC
GATGTCAGCC CGGCTCTCAA ACGACTGGGC GAGCGTCTTT CCAAACATGT TTAA
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| Protein sequence | MATHAHGTST TASIETNPTI GDYLIRRLLD YGMKDIFGIP GDFVLQFYGD LENSPIRVIG
CTREDNAGYA ADGYARIHGI GGICVTYCVG GLSVCNSVAG AFAEKSPVVV ITGSPGVEER
RSNPLLHHRV REFSTQREVF EKITIASTVL DDALTACREI DRVLEACVRF KRPVYIELPR
DMIKVRCPYQ HVPQAGTIKS DKAALKEALS EAGAMLAKAE RPIILAGVEM HRFGLADELI
HFAEKFEIPI SATLLGKSVI SEKHPLFIGI YEGAMCRESV RKYVEQSDCI VMLGTFMTDI
DMGIFTAELD TSKTIYATSE TLKISHHHFH DILVADFVKG LSKLDVKIAK RPLPPKAKPT
PKFVAVPETA VTSARLFARI NELLDEKMVV VADVGDCLFG AADLTIYRDT EFLSPAYYTS
MGFAIPAALG VQVARKDLRP IVLVGDGAFQ MTCLELSTVL RHNFNPIVIV LNNKGYTTER
FIQDGPFNDI LNWDYHRLPD LLGGGWGFEV RTEGELDQSL HAALSNKETF CLLNVHLDPL
DVSPALKRLG ERLSKHV
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