Gene Plim_0871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0871 
Symbol 
ID9137556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1119299 
End bp1120171 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content55% 
IMG OID 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003628914 
Protein GI296121136 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATGGGG CCTGCTGGCT GGCAGAAAAA CGTGGAAATG ACGGTGTCGA CCTCCGATAC 
CGGGATTATC GCCCTGATCG AAGTGCTGGC TGGACGACTT TGATTGTCCA TGGAGTGGCC
GAGCACGGTG GCCGTTATGA CCATGTTTCT CGCTGGCTGC TGCAGCGCGG TGTCCGGGTG
ATCGTCCCGG ATCTTCGCGG CCATGGTCGC TCGGGCGGTG TGCGAACTTT CGTCAAGCAC
TTTTCCCAGT ACATTGATGA TCTGGTGCTG TTGAGAAAAT CTCTCGAAAT CGATCCGCAA
CGCCTGATGG TGCTGGGACA TAGCATGGGG GGGCTGGTCG CTACTCGATA TGCTCAGCTC
GAACCGCGCG GCCTGGCAGT TCTGGCACTC TCTTCCCCAC TTCTCAAACT TCAGCAACAG
ATCTCACCGC TCACGCTGGC GATGGGGGCC ATTTGTAACA TCGTGGCGCC GGCGACGCGT
TTCCCCACGA AATTCCGACA TGGACAGATG ACGAAAGATC CGCTGGCTCT GGCTAAACGT
CAAAGCGATC CTTTTCTCCT GAAGAGTATC ACGGCTCGCT GGTTTTTCAG TATGAAGTCG
GCACTTCAGC AGGTTCACCA GGAAGCATCG GCCATTCGTG TCCCTGTGAA AATTCTGCAA
GGGACAGATG ATCGCACAGT GCATCCCTCA GGGGCACAGG AATTTCTCAA TGAGTTGAGC
CCAGGCATAA CCGCCGAACT TCAATATCTG CCCCAGCATC TGCACGAAAT TCTCCAGGAG
TCCGACTGGG AAACTTCTCT CAAGAGCTTT TTCGATTTTG GCAACGAACA GATCGCTCAG
CCTTCCCTGC GGCACATTCG ACCGACGGGT TGA
 
Protein sequence
MNGACWLAEK RGNDGVDLRY RDYRPDRSAG WTTLIVHGVA EHGGRYDHVS RWLLQRGVRV 
IVPDLRGHGR SGGVRTFVKH FSQYIDDLVL LRKSLEIDPQ RLMVLGHSMG GLVATRYAQL
EPRGLAVLAL SSPLLKLQQQ ISPLTLAMGA ICNIVAPATR FPTKFRHGQM TKDPLALAKR
QSDPFLLKSI TARWFFSMKS ALQQVHQEAS AIRVPVKILQ GTDDRTVHPS GAQEFLNELS
PGITAELQYL PQHLHEILQE SDWETSLKSF FDFGNEQIAQ PSLRHIRPTG