Gene Plim_0844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0844 
Symbol 
ID9137528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1086936 
End bp1087961 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content54% 
IMG OID 
Productprotein of unknown function DUF1559 
Protein accessionYP_003628887 
Protein GI296121109 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATGG GTTCGCGGAA GTCTGGCTTC ACACTGATTG AGTTGCTGGT GGTGATTGCA 
ATTATCGCCA TCCTGATTGC ATTGCTTCTC CCTGCTGTCC AGCAGGCCCG TGAAGCTGCA
CGCCGTACAC AGTGCCGTAA CAACCTGAAG CAGTTGGGTC TGGCACTGCA CAACTACCAT
GACAATGCAC TGGTTTTCCC ACCAGGACAC ATTGGCTTCA ATAACGCCAC CACTCCATCG
TTCCAGGGTT TCGCCTGGTC AACCATGATC CTGCCGTTTG TGGATCAGGC ACCACTTTAC
AACGTGCTGG CAAACCGCTT TAGTTCCTCA GTGCCTTACT CCACAGCTGT GACTCCTGTT
GTACCGACTG CTGCTGAAGT GGCCGCAGTG GCTACGACTT TCCCAGCGAT GCGGTGTCCT
TCGGACGTGG GTTCCAACCT GGTGAATGCC ACTGCCATTT CCGGTACGGC GGCTTCAGCC
ACCTATGCCA ACGCTGTGGG TCGTTCAAAC TACCCAGGTG TCACTGGTGT GTGGTTGAAC
GGTACAACAT GGGATGGTTT GGAAACAGCA CAGGCTAACT GGACAGTCGC TAACTTCCGT
GGCATTTTCG CTGAGAATAG CCGAGTTGGT ATCCGCGACA TGACTGACGG TACAAGCAAC
AGTATCGTTG TTGGTGAACG CTGTAGCCCA GCAACTGAGA CTGCAGGAAC GAATGGTATG
GCTTCTTGGG TGAGCTGCTT TGATCGCGGT ACACAAGCTG GTCGTTCATC GGCCTACGGC
GACGCCGCCC AGCGTATCAA TGTGAACGTA GCAAGTGGAA CAGTTGTGAG CACTGCCGGT
GCTACCGTTG CCATCACAGC TAACGGTCCT CGCGGGCAGA ACTCAGCATT CAGCAGTCTC
CACACAGGTG GTGCCCACTT CCTGTTGGGT GACGGCACTG TCAAGTTCAT CAGCGAGAAC
ATTGACATCA CCATCTACCG CAACTTGGCT CGCGTTAACG ACGGCAACGT CATTGGCGAG
TTCTAA
 
Protein sequence
MKMGSRKSGF TLIELLVVIA IIAILIALLL PAVQQAREAA RRTQCRNNLK QLGLALHNYH 
DNALVFPPGH IGFNNATTPS FQGFAWSTMI LPFVDQAPLY NVLANRFSSS VPYSTAVTPV
VPTAAEVAAV ATTFPAMRCP SDVGSNLVNA TAISGTAASA TYANAVGRSN YPGVTGVWLN
GTTWDGLETA QANWTVANFR GIFAENSRVG IRDMTDGTSN SIVVGERCSP ATETAGTNGM
ASWVSCFDRG TQAGRSSAYG DAAQRINVNV ASGTVVSTAG ATVAITANGP RGQNSAFSSL
HTGGAHFLLG DGTVKFISEN IDITIYRNLA RVNDGNVIGE F