| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0794 |
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| Symbol | |
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| ID | 9137478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 1030481 |
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| End bp | 1032349 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_003628838 |
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| Protein GI | 296121060 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGTCA GAATTCACAC TCACCGCTGG CGTGCAGCAC TGGTTTGGGG ACTTTGCCTC
TGCCAGTCCT TTCTTTCCTA TCCAGGGCTC ACTTCGTCCT CTGGAATGGC CTTCGCACAG
AACGGCAATG CTCCCGTCGC CGGAGAAGTC GTTCAGATCA CGGCATCGCG AACAAAGCTC
GAAATTGCCG AGCGCTTTGC CCGCGTTGTC CAATTCCCGC GCAAAATTCT GCGTGTTGAT
GGATTTGATC CGGCAGTTCT CAGTGTGACT GCTCTCGCCC ACGATCAGCT TCGAGTGCAA
GGAATCACCG AAGGAATCAC CACCATGGTG ATCACCGACG AAAATGGAGC GATCACCACC
ATCGATGTCA TGGTGGCGGG CGATGCTCGA TTACTGCAAG CGGTCCTGAG CCGCGAATAC
CCCAATACCT CCGTCACCGT CACCAAGCTG AAAGACAACG TCCTTTTGCG TGGCTGGGTC
GTCGAACCAC AACAAATCAC CGAGATCGTA GATATCGCCA AGCTCTATTA TCCTAACGTC
TTGAATCAGA TGAAGATGGG TGGCCCGCAA CAGGTTCAAC TCCGCTGTAA AGTGATGGAA
GTTCAACGAT CCAAGCTGCG TTCACTGGGC CTCAATTTCA CTTATCTGGG CCGTAATGTC
GCCTTTTCGA GTACCCCGGG TGCGATCTCT CCCCTGGATG CATTCACCGT ACCGATTGGC
GGGCCGCCAG GTGTTGGTCT GGCTCAGTCG GGTTTTCGTA ACGCGACCAT GTCATTAGGA
ATTGTGGGTG ACGACTTTGC TTTCGGTGGT CTTCTCGAAG CACTTCGCGA AGAAGGCTTG
CTCAAAATCC AGGCCGAACC AACCATCGTC ACCCGCAGTG GCGAACCAGC CAAAATTGTC
AGTGGTGGCG AATTCCCCAT CCCGGTTCCT CAAGGTTTAG GAACCATTGC CATCGAATGG
CGAGAATTCG GCGTCAGGCT CGAATCAGTC CCGATGATTC TTTCACCCAA TCGTCTGAAA
CAAACCATCA TTGCTGAAGT GAGCGAAAGA GACCTCACCA ACGCTGTCAC ACTCAACAGC
ACCACAGTTC CCGGCTTGAC CAAACGAACT GTCGAAACTC AAGTCGAAAT GAACTTCGGT
CAAACACTGG CCATCGGTGG TCTGATTTCC TCCCGCAAAA CCGCACAAAC ATCGAAGATC
CCCTTCCTGG GCGAACTTCC CTACGTGGGG GCCGCATTCC GCCGCGTGAA TTACGATGAA
GCCGAAACCG AACTCCTCGT GCTGATCACT CCCGAGTTTG TCAGTGCCAT GGATCCTGCT
CAGGTTCCCG ACAGGCTGCC CGGTACCGCA TCGGCAGTTC CTACAGATCG CGAACTCTTC
GGCCAAGGGA TCATCGAAGT TCCTAACTAT GGCGATCCCT GCCCCAATTG TGGGCCTCGT
GGTGGATCGT CCACACCATC CGGTGTGACA GGTTCAGGCC TCTCGCCAAT TCCTGCAGAT
TATCCATTGC CACCTGCCGC ACCAGGTCTG ATTACTCCTG GCGGGCCATT GCCACCACCA
CCATCTCCCG GAATCAGCAA TCCCGGTGCT GGCCAGCCAT CAGCACCATG GCCAACAGAA
CGATCCACGC CTGCACCACA AGAATTTGTA CCTCCGATCA GTCCGCCAAC TGGCTCACCA
GGAGATATCC CGGCTCCTCC CGGGGTGACT CGCAATCGCA ACAACTCCAC AGGTCAATCC
GTTGCCGGAA GTTCGAAGTT CAGCGGGCCT CGCACTCCAG CGACGGGTCG ATCGGATGTC
GAACAAGCGG GAAGCCGAAA TCCAGCCTCT GGCGGTTTGA TTCAACCAGT TTCAGGAACT
CGTCCATAG
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| Protein sequence | MQVRIHTHRW RAALVWGLCL CQSFLSYPGL TSSSGMAFAQ NGNAPVAGEV VQITASRTKL
EIAERFARVV QFPRKILRVD GFDPAVLSVT ALAHDQLRVQ GITEGITTMV ITDENGAITT
IDVMVAGDAR LLQAVLSREY PNTSVTVTKL KDNVLLRGWV VEPQQITEIV DIAKLYYPNV
LNQMKMGGPQ QVQLRCKVME VQRSKLRSLG LNFTYLGRNV AFSSTPGAIS PLDAFTVPIG
GPPGVGLAQS GFRNATMSLG IVGDDFAFGG LLEALREEGL LKIQAEPTIV TRSGEPAKIV
SGGEFPIPVP QGLGTIAIEW REFGVRLESV PMILSPNRLK QTIIAEVSER DLTNAVTLNS
TTVPGLTKRT VETQVEMNFG QTLAIGGLIS SRKTAQTSKI PFLGELPYVG AAFRRVNYDE
AETELLVLIT PEFVSAMDPA QVPDRLPGTA SAVPTDRELF GQGIIEVPNY GDPCPNCGPR
GGSSTPSGVT GSGLSPIPAD YPLPPAAPGL ITPGGPLPPP PSPGISNPGA GQPSAPWPTE
RSTPAPQEFV PPISPPTGSP GDIPAPPGVT RNRNNSTGQS VAGSSKFSGP RTPATGRSDV
EQAGSRNPAS GGLIQPVSGT RP
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