Gene Plim_0780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0780 
Symbol 
ID9137463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1013567 
End bp1014553 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content53% 
IMG OID 
Productinner-membrane translocator 
Protein accessionYP_003628824 
Protein GI296121046 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.219344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGAA TACTCGGAAT TCTTGGCATT CTGATCGCCG TGATGGTTGT GACTGGCATT 
CTTCAACCAG CCTTCCTCAG TGGATATAAC CTTTCAAACG TCACTCAGCT TTCGGCCTAC
TTTGCCATCC TGAGTATTGG CGTGATGTTC GTGATCATCA CCGGCGGGAT CGATCTTTCG
ATTGGGCCAG TCGTGGGCCT TGTGGGCTGC CTGCTCCCGC TGCTCATTGT GAAGTATGGT
TTTCATCCGG CCCTGGCTAT TGCTTTTGTC ATGGGAGTAG CCGCACTCAT CGGGACGACG
CATGGTCTGT TGATTACCAA GGCAAAGCTT CAGCCGTTTG TGGTGACACT TTGCGGCTGG
CTGATTTATC GTGGTCTGGC CCGCTGGATC ACAGGAGATG CCAACCAGGG GTTTGGGAAT
AGCTTTAACG GCCTGCTGGA AATCTCTCGC AAAAAGATCC CTTTGCCCGG GGATTATCAA
GTGCCGATCC CGGTGGTTTA CATGCTGATT ATCGCTGTGC TGGCTGCCAT TTTTTTGAAC
AAGACGGTTT GGGGTCGCTA CCTGTATGCG ATTGGTCGCA ATGAACAGGC CGCACATTTC
AGCGGGATTA ACACCGATCG AATCAAGTTG ATGGCCTATG TACTGTGTTC AACAATCGCC
GGGTTTGGCG GGGTGCTGCT CGCTTTTGAC CTCAATTCGA TGCAACCCAG TTCGCATGGG
AACACTTATG AATTGTATGC GATTGCGGCC GCAGTTCTAG GGGGTTGCAG TCTTCGCGGC
GGTGAAGGAT CAGTGGCGGG TGTGGTGATT GGCGCGGTCC TCTTGAGAGT GCTCTACAGT
GCTAACAATA TGCTCGGGAT TCCCAGCACG TTGGAATATG TGACGATCGG CACGGTGCTT
CTGGCGGGTG TGCTGGCCGA TGAAGGTGTG AAGTGGTACT CGCAGCGGAG AAAACTGATT
CAATCCGCCA GGAAAGTCGC CGCTTGA
 
Protein sequence
MKRILGILGI LIAVMVVTGI LQPAFLSGYN LSNVTQLSAY FAILSIGVMF VIITGGIDLS 
IGPVVGLVGC LLPLLIVKYG FHPALAIAFV MGVAALIGTT HGLLITKAKL QPFVVTLCGW
LIYRGLARWI TGDANQGFGN SFNGLLEISR KKIPLPGDYQ VPIPVVYMLI IAVLAAIFLN
KTVWGRYLYA IGRNEQAAHF SGINTDRIKL MAYVLCSTIA GFGGVLLAFD LNSMQPSSHG
NTYELYAIAA AVLGGCSLRG GEGSVAGVVI GAVLLRVLYS ANNMLGIPST LEYVTIGTVL
LAGVLADEGV KWYSQRRKLI QSARKVAA