Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0736 |
Symbol | |
ID | 9137419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 957943 |
End bp | 959430 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | sodium/hydrogen exchanger |
Protein accession | YP_003628781 |
Protein GI | 296121003 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.67035 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGATTC CATCCAGCGA TCCTCCGGCT CACAGCGCGT TAAAGATCAA CGTGTGGAAA TTCTGGGCCA CCTATCTGGT CACGATTGTC GTCGCCATCT TCATTGTGGT CATCATCTGC CAGTCTGGCG AACAGCTGCT GGTGAATCGC AGTCATTCCG TCAACAGTAT CGCCGACGAA CCTCAGGACT CAACCACAGC CAAACCTCAG GGACATGCCG TTCATCTGGT GGCACAACTC ATGTTTGCCA TGGCCGCGGT CTTAATTGTC GGTCGCTGCC TGGGTCAGGT GTGCCACCGG CTGAATCAAC CGGCTGTGAT TGGTGAAGTT CTTGCCGGGA TTGCCCTGGG CCCATCGCTG CTTGGAGCCA CTTTCCCGCA AGCCACAGCC ACGCTCTTTC CTGACACCGT GATGCCGGCT CTCAGTGTGA TTGCCCAGTT GGGGGTGATC CTGTACATGC TGAACGTGGG CCTGGAGTTC GACATCTCGG CACTTCGTTC GAAAGGCCAT CAGTCCCTTG CCATATCTCA TGGAAGTATC ATTTTCCCCA TGATTCTCGG CTGCATGGCT GCGATTGCCC TTTATCCGTC ACTGGCTGGC GAAGCTGCCA GTTTTACCCC CTTTGTTCTA TTCGTGGGTG TCAGCCTTTC GATTACGGCT TTTCCTGTGC TGGCTCGTAT TCTCGCCGAT CGCGGGATGT CACAGACTCC GCTGGGTGTC ATGGCACTCA CTTGTGCCGC TGCGGACGAT GTGACCGCCT GGTGCCTGCT AGCGATTGTC ATCGGAATCG TCCAATCGAC TGCGGCCGAT GCCATCAGGG TTGTCAGCTG TGCTGTCATG TACTGCCTGT TCATGCTGCT GGCCTTTAAA CCCTTGTTAA CCCGCATCAC GACATCCTCC ACTGTGGCCG GGATCCAGAA TTCTGGCGGC GAAGAAATGG GTGAAAGCCG CAGTTCAAGC CAGGTGATCT TCCTGCTGGC TTTGGGACTC ATCTCGGCTG GAATCACTGA TTTGATCGGG ATTCATGCAC TTTTTGGTGC GTTTTTTTTC GGTGCACTGA TCTCGCACCA ATCGGCCGCA GGGAAGGGAC TTGCCAGTTT GCTCAACTCC TTCGCACCCG TCATGCTCCC CGCGTTTTTT GCCATCACGG GTTTGCGCAC ACAAATCGGT CTGCTCTCCT CCTTCACTGA TATGCTTATC TGCCTGACGC TCATCGCAAT GGCAATTCTT GGAAAATTCG GCGGCAGCTA TCTTGCGGCA CGTTGGTCGA ACGTATCGCA CTTCGATGCA TTGCGCATTG GCTCGCTGAT GAACACCCGC GGGTTGATGG AGTTGATCGT CTTGAATCTC GGCCTCGATC TGGGTGTTCT CTCTCCCAAA CTGTTCACGA TGCTGGTCAT TATGGCCATT GTCACCACGA TGATGACCGG CCCCTGGCTC GCATGGATCG ACCGGAAAGA AAAATCCAGT CCGCCATCCC TCAATTGA
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Protein sequence | MEIPSSDPPA HSALKINVWK FWATYLVTIV VAIFIVVIIC QSGEQLLVNR SHSVNSIADE PQDSTTAKPQ GHAVHLVAQL MFAMAAVLIV GRCLGQVCHR LNQPAVIGEV LAGIALGPSL LGATFPQATA TLFPDTVMPA LSVIAQLGVI LYMLNVGLEF DISALRSKGH QSLAISHGSI IFPMILGCMA AIALYPSLAG EAASFTPFVL FVGVSLSITA FPVLARILAD RGMSQTPLGV MALTCAAADD VTAWCLLAIV IGIVQSTAAD AIRVVSCAVM YCLFMLLAFK PLLTRITTSS TVAGIQNSGG EEMGESRSSS QVIFLLALGL ISAGITDLIG IHALFGAFFF GALISHQSAA GKGLASLLNS FAPVMLPAFF AITGLRTQIG LLSSFTDMLI CLTLIAMAIL GKFGGSYLAA RWSNVSHFDA LRIGSLMNTR GLMELIVLNL GLDLGVLSPK LFTMLVIMAI VTTMMTGPWL AWIDRKEKSS PPSLN
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