Gene Plim_0702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0702 
Symbol 
ID9137384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp922008 
End bp922964 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content53% 
IMG OID 
ProductAldose 1-epimerase 
Protein accessionYP_003628748 
Protein GI296120970 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAATT TAATCCAACT CATTGATCAG CAGACGGGTG CCAAGGCCAC CATTCTTCCC 
GACCTGGGGT TCAACTGCTT CCAATTCACA GCCGTGATTG ACGGGCAGCC GGTGGAAGTG
CTGGATGCAC CGGCAGATTT TGCCTTGGGG ACTGCGAAAC CTTCCAGCGG TGGGATTCCG
ATCCTTTTTC CATTCCCGAA TCGAATTCGC AGTGGTCACT TCCGCTGGGC AGGCCAGGAT
TATCAGCTCC CTCTGAACTC GCAGGGAAAG AATGCCATCC ACGGATTTGT TTACGACCGT
CCTTGGCGTG TGACGGCTCA TGGGAATGAT TTTGTGACCG GCGAATTCCA GTTAAGTGTC
GATGCTCCTG ATCGCATGAG CCTCTGGCCG GGTGATTTCC TGCTGTGCGT CGATTACGAA
CTCATTCATA ACCGGCTGCG TGCGAATTTC CGGATTACCA ATGTTGGTTC CAGACCCATC
CCGTGGGGCT TGGGAACGCA TCCTTACTTT CGCCTGCCAC TTTCTGCCCG GGGTCGGTGG
GAAGACTGCG TGATTGAACT CCCTGTCACT CAGCAGTTTG AACTGGTGGA GAGTCTGCCC
ACAGGGAAGA TCGACGCCAT TCAGAACGAG CTGGACTTCC AAAGTGGTGA ATATGTCTCG
ACTTTGAAGC TCGACGACAT TTTCACTTCG CTCGATTATG ACGGCCCGCA GTTCGATATG
ACGCTCATTG ACGAAGCTGC CGGCCTGCAA GTGGTGCAGA CCTGCCCACC GATCTTTCGC
GATGTGGTGG TCTATACTCC AGCAGGGCGA CCTTCAATCT GTATAGAACC TTATACCTGC
CCCACTGATG CCATTAATCT GGAGAGTCAG GGGTTATCAG CCGGTCTACG AGTTCTGGCT
CCAGATGCTG AATTTCATAC ATGGGTTGAT ATCAGCGTCT CCAAAGTGAT TGCTTAA
 
Protein sequence
MTNLIQLIDQ QTGAKATILP DLGFNCFQFT AVIDGQPVEV LDAPADFALG TAKPSSGGIP 
ILFPFPNRIR SGHFRWAGQD YQLPLNSQGK NAIHGFVYDR PWRVTAHGND FVTGEFQLSV
DAPDRMSLWP GDFLLCVDYE LIHNRLRANF RITNVGSRPI PWGLGTHPYF RLPLSARGRW
EDCVIELPVT QQFELVESLP TGKIDAIQNE LDFQSGEYVS TLKLDDIFTS LDYDGPQFDM
TLIDEAAGLQ VVQTCPPIFR DVVVYTPAGR PSICIEPYTC PTDAINLESQ GLSAGLRVLA
PDAEFHTWVD ISVSKVIA