Gene Plim_0690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0690 
Symbol 
ID9137371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp907292 
End bp908497 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content54% 
IMG OID 
ProductCholoylglycine hydrolase 
Protein accessionYP_003628736 
Protein GI296120958 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAACT TGAGTATCGG TGCCAGGTAT GGGCTCGCAT TGCTGCTGGG CCTGGCAATC 
TTTACCCGAC CGGCGGCAGC CTGCACCGGA ATCACCTTAA GACCCAAAGA CGGATCGATC
ATTTACGGCA GAACTCTTGA GTTTGGTGCC GATCTGTTGT CGAACGTGGT GATTATCCCC
CGCGGCTTTG CCTATACAGG GACCACACCT GATGGAACGC CGGGCCTCAA GTGGAAAAGC
AAGTACGCTT CGGTGGGGGC CAATGCATTT GGGCTTCCCG TGCTGCTGGA TGGACATAAC
GAAAAGGGGC TCGCTTGCGG CCTCTTCTAC TTTCCGGGCT ATGCCAAGTA TCAATCGATC
AGTCAAGAAG ATCTCCCTCG GACGATTGCT CCCTGGGAAG TGGGGGCCTA CATACTGGGA
ACCTGCAGTA CGATCGAAGA AGCCACCAAG GCGATTCGCA GCGTCAAGGT GGCTAATACA
GTCTTGCCGC AGATGAATAT GGTGCCTCCT GCCCACTACA TTTTTACGGA TGCTACCGGC
CAGGCCATTG CCGTCGAGTA CGTCGGTGGA GAGCTCAAGA TTCACGATAA TAAGCTCGGA
GTCTTCACCA ACGCTCCGAC GTTCGACTGG CACGTCACGA ATTTGAGTAA CTATCTCAAC
CTGGATCCAC TGGGAAAGAC CTCTGTTAAG TTAGGTGAAC AGCAGGTGAA ATCGCTCGGC
ATGGGAAGCG GCATGCTGGG ATTGCCTGGC GACTTCACGC CTCCTTCGCG GTTCGTGCGG
GCTGTCGCCT TCTCGAAAAC AGCACTTCCC GTCCAGACCA GTCGCGAAGG GGTGCTGCAA
CTCTTTCATC TTTTGAATCA GTTTGATATC CCCAAAGGGT CAGCAAGGTC ACTCGAAAAT
GGTGAAGAAG TTGCAGATTA CACGTTGTGG ACGAGCGGAA ATGATCTGAC GAACAAGCGA
TTCTACTTCC GCACATTTGA GAACAGCGAA ATCCGCATGG TGGACCTCAT GAAGGGGCCG
CTAGATGGAA CAGAGATGGT GGTCTACTCT ATGAAAGGTG AGCAGAAAAT CCAGGAACTC
ACCGCACCCG CTCAAAAAGT TTCGAGCATC TCGCCAGCTA TAGTGCCTGT TAAGATCGTT
CAGAACGCCG AAACCACCCG CCGCCAGCGA ATCTTCCGAC GCCCAGCCAA TTTGATTGCT
CCGTGA
 
Protein sequence
MLNLSIGARY GLALLLGLAI FTRPAAACTG ITLRPKDGSI IYGRTLEFGA DLLSNVVIIP 
RGFAYTGTTP DGTPGLKWKS KYASVGANAF GLPVLLDGHN EKGLACGLFY FPGYAKYQSI
SQEDLPRTIA PWEVGAYILG TCSTIEEATK AIRSVKVANT VLPQMNMVPP AHYIFTDATG
QAIAVEYVGG ELKIHDNKLG VFTNAPTFDW HVTNLSNYLN LDPLGKTSVK LGEQQVKSLG
MGSGMLGLPG DFTPPSRFVR AVAFSKTALP VQTSREGVLQ LFHLLNQFDI PKGSARSLEN
GEEVADYTLW TSGNDLTNKR FYFRTFENSE IRMVDLMKGP LDGTEMVVYS MKGEQKIQEL
TAPAQKVSSI SPAIVPVKIV QNAETTRRQR IFRRPANLIA P