| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0684 |
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| Symbol | |
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| ID | 9137365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 897079 |
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| End bp | 900906 |
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| Gene Length | 3828 bp |
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| Protein Length | 1275 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | PBS lyase HEAT domain protein repeat-containing protein |
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| Protein accession | YP_003628730 |
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| Protein GI | 296120952 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCACTC TCGACGAAAT TCAGCGACTA AATGATGGCC AGTTTCATCG GCTTGGTGAC
GACCTGCTAC GCAGGAGCGA ATCCCGATAC CGGCGTCTTC GAACCCACGG TTTGAACGAA
CGTGGGGAGA GCATCAAAGG CCAGCCAGAT TCCTATGTTG GAGAGACCGC TGCGACTTGT
AGCGTGGCGG TTTGTTACAC AGTGCAACGA TCTGGTTGGT GGAACAAAGT GGTGCAAGAC
GTCGGGGAGG CTGTTGCGGC TTGTCCGATG GCGACCGGGG TGGTTGTAGT CATTCCGCAC
AATGCCGACC GAGATGGCCC CCAGGACAAG ACAATTGATT GGCTTTCAGA GGCACGTGCG
GCAGCTGGCA AAGCAATCCT CCGGGTGATC GACGGGCGGG AAATTAGCCA ACTGCTCGAT
ACGGATCATC AAGACCTGAG ACACAACCAT CTAGGCATCC CTTACTCCCG CCTCTCTGGG
TCTAGTATCC TTGCCAGCTG TCGAATGGCC TCGCAGACTG CAATCGATTA CATAAGAGGG
AGCGGCAGGT ATGACCCAGA AAGGTATTCT CACCGGAGTT CCGACAGAGA GCTATATCGG
GTGTGGCAGT CGGCGTACCG GTACAATGAC AGCAGCGACC GGCGTGTTGC CCCTATCCGA
TTGATCGCAC TCGTGAACGA CTCTGGGGTT GGGAAGACCA GTCTGGTTTG TGAGCTCACC
CGCACACTTG GGGCGGTTCT TCCGGTTCTG CTCATTCAGG CCCGAGATAT CGAGTTCGGT
CCGGAGGACA AACTCGTTGC CGCCGTGATA AACTATGCCC AAGGGTTCCT GGATCCATCT
ACCCGTGTGA TCGAAGAGGC GGCTTTGTCC AAGCTGCTGT CCGGTTCAGT GCCCCTGACG
GTAGTGCTGG ATGGATTAGA TGAAGCACAC AATCCAGAGG CCGTACGCAA AGCAATCACC
TTCTGGTTGA GGTCGAAATT GTGCCAGGTC AGCATTTTGG TGGTGACCTC ACGTCGGGAG
TTTTGGCAAA CCTGTGTGGA CTCGTCTTGG GTCAAATGGA TGCCCACCTC GAACCTCGAC
GACCGCTCGC CGGTGAAAGT CGCTGAACGC TTGCAAGTCG AAAAGAGTGA TCCGGCTGCG
GGCCTTCCGC TTCCTGACCG CTTCAACGAA GGAGAGCTTG AGGCGGCATG GCTGCGGGCT
GGCCGGACTC GTTCGGAGTT GGCTATCTTG CCAGCCGATG CGAGAGAAGA ATTACGTCAT
CCATTCACGC TCCGAGTGTT TCTTGACCTT CAGATGCAAG AAGGTCTTTC GCCGAAGAAG
GTAACGAGGG CGGCCCTGTT GGAGTGTTGG TTGAATCACC GCCTCGATGC AGAGACGCTT
ACAAGTGAGC GGATCACCCG CAGCCACTTT CAACAAGCGC TTCGAATGGT GGCGAGCCGG
ATTGCCGAAA CCAGTCATTG CTCCGTATCC GTGGACGAAC TATCGGAAGT GCCTCGTTTT
GACTCCTCAC ATCCGCCGGG TCCAATCCTT CAACGGATGA TTGAAGCGGG CATCCTGGAA
AGCCTGCCAA ACCAATCCGA TCGCATCAGA TTTACGGTTG AAACAGTCCA GGACTTCTAC
CGGGCTGAAG CGGATGTCGA GGACATCAAG AGCAACCCTG CACATATAGC GGAAGCCTTC
TCGCAGCTTC CGTTTACGAC GGCGTACTCC AGGCTTGTGC GAATAGGGTC CCGGCTCATC
GGCGAGGATG TTCGTCACGA GTTCATCCAG CGGCTACTGG AAGCGTCTCC AATAAAAGCT
GCCATTGTTG TGCGAGCACA TCCGGATTGC TACACGGCAG AAGTCAGGAC AAGAATCGCA
GGTGAACTCG GTGCTCAAAT CACAGACCGT CATCGTGTTC GGGCTGCGAT GGCGATAACT
CTGCTCGGAG AGTTGAACTG TCAAGAAGCT ATCGACGTAC TTGGGAAGCA TCTTCTCCCT
CCTGCTGACC TTCACAACGA CCTGAAGTCC CTCGGCGCGA CAGCATTTAC AAAACTTAGC
TATGCTCCCG CCGCGGCTTT TGTATACCGC TGGCAGTGGT TCGGCACGCG CCAAGGCAAC
GACACTTACT ACTTTAAGGA TCTCTTGGCA TTCATTCGTG ATGCGACATT TGAATTCCGG
CTTGCCCTGG CGGATCAGTC CGTCCTACAA CTCTCAAGTG CCACTGGTAC GAAGGAACAT
GTCAATGCAG TGACAGTGCT GGCCTATCTA GGCGATTGCC GTCTTGTGGA TCACTTGGCT
TCCCGACTCA CCCAGAACGT ACTGCTCGAG CACTACGAGA ACCACGCCCT GATTGCCCTC
GGATCGGATG CAGCTGGAAG GCTCTTCGCC CAGTCTGTGA AAGCGATTGG GGACCGTCTC
GCTCCGCTGC CAGACGATCA TGCTAATAAC GATGCTCGGA ACGAATTGAT CGGACTGGTC
CACTTCGTGG TTAGTGACGT GCGCTACCTT TTAACGCCTG CTTTTGAGCC GCATATTAAA
CAACTCATCG AAAATGCCAA TCCAGACGTA TCATGGATTG CTATTCACTT AGCAAAACGA
GCTCATGCCG TATCGCTGCT GTACCCTGCC GCAATAGCCG CTTCCAAGCG GAGTGGCTGG
ATTGAGTTGG ATCACGGTGA GGAACGAAGT TGCGTGAGTG CCGACGAGTG GTTGAGATGG
TGGCGGCAAT CAACCGACGT TGCAATTCGC CAAAAATTAC TGAGACTGCT TCCCCGTTAC
CCGAATGCAG AGATCGAAGA GATCCTTCTA GATTGCCTCG ACTTGCCTGA ACTGTGTGCA
TCAACGGCGA CACGGCTTGG AGAATACGGG GCGATCCGCT CGGCACCTCG TCTACGGGAG
ATTCTTTCCG AAGCGGTCAC CACCGATGAC CAATCGGCCA AGTCGTCAGC CGCTCATGCG
TTAGGTGATT TGAGGGACGT GGCTGCAGTG CCGCTTCTGG AGAAGCTTGC CACTGAGCAT
TCTGACGAAT GGGTCGGGCT GCAAGCGATT GCGAGCCTCG GCCTGATTGG GAACTCAGAA
GCCGAGTCCG CCCTAGGCCG TCTTCATCAA CTTCAAAAAG GGGACGGCAT TGAGGACCAC
ATATTTGAAG CCCTCCTCTG TTGTGGCTCT CCCACGGCAG TCGCAGAGGT GATCAAGCAT
GCAAGTTCAC GACTGGACGG CTCTGAGTGG CTGTGTGAAC GACTTGGCCG CCTTTCCTGG
ATGCGTGGGT GGCGATGTGG CGAGTACTAC ACACATATTT ACACAGCTGA GTTAGTTGAC
TACCTGAAAT CTCACTGCAA ACTGGGCTCC CCTGAAAAGA ACTGGGACAT TGGGGATGCC
TTTCGTCAAA TCGATAGCCC GGAAGTTCGG ACACTGCTAC AGAAGTGGGG GAATCGCCGT
GGATCGCCTG AAGATGCGGT TGTGCGGGAA AGCGACCAGC GGCGGCTTTC GGATATGTGC
TATTGGGAAC TTCGAAATCG TGGCGACATA TCGGCCATTA GTTACACACT CGATGAATGT
GCTGATGACA GGGACGATAT TTACGTCGCA CGTGCCGCTC TCCTTCTTCA AACTTTCCCC
ACCGCTGCAG TTGCCAATCA ACTTCAGTCA CGGCTCAACG TGGCGACAAC GATATCCGAG
ACGCTGAGAA TGCTCGCCTT GCTCGGTCGG TTTGGACAGC AGGCTGACGC TGAACTCGCA
GCTAAGTTTG TGAATCATGC TAACGACTTG GTGGCGAATG TGGCATGTGA AACCATGCTG
CGTCTGAGCG ATCCATTGCT CGTACCGGGT CGCTGGCGAG AGATGTAG
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| Protein sequence | MGTLDEIQRL NDGQFHRLGD DLLRRSESRY RRLRTHGLNE RGESIKGQPD SYVGETAATC
SVAVCYTVQR SGWWNKVVQD VGEAVAACPM ATGVVVVIPH NADRDGPQDK TIDWLSEARA
AAGKAILRVI DGREISQLLD TDHQDLRHNH LGIPYSRLSG SSILASCRMA SQTAIDYIRG
SGRYDPERYS HRSSDRELYR VWQSAYRYND SSDRRVAPIR LIALVNDSGV GKTSLVCELT
RTLGAVLPVL LIQARDIEFG PEDKLVAAVI NYAQGFLDPS TRVIEEAALS KLLSGSVPLT
VVLDGLDEAH NPEAVRKAIT FWLRSKLCQV SILVVTSRRE FWQTCVDSSW VKWMPTSNLD
DRSPVKVAER LQVEKSDPAA GLPLPDRFNE GELEAAWLRA GRTRSELAIL PADAREELRH
PFTLRVFLDL QMQEGLSPKK VTRAALLECW LNHRLDAETL TSERITRSHF QQALRMVASR
IAETSHCSVS VDELSEVPRF DSSHPPGPIL QRMIEAGILE SLPNQSDRIR FTVETVQDFY
RAEADVEDIK SNPAHIAEAF SQLPFTTAYS RLVRIGSRLI GEDVRHEFIQ RLLEASPIKA
AIVVRAHPDC YTAEVRTRIA GELGAQITDR HRVRAAMAIT LLGELNCQEA IDVLGKHLLP
PADLHNDLKS LGATAFTKLS YAPAAAFVYR WQWFGTRQGN DTYYFKDLLA FIRDATFEFR
LALADQSVLQ LSSATGTKEH VNAVTVLAYL GDCRLVDHLA SRLTQNVLLE HYENHALIAL
GSDAAGRLFA QSVKAIGDRL APLPDDHANN DARNELIGLV HFVVSDVRYL LTPAFEPHIK
QLIENANPDV SWIAIHLAKR AHAVSLLYPA AIAASKRSGW IELDHGEERS CVSADEWLRW
WRQSTDVAIR QKLLRLLPRY PNAEIEEILL DCLDLPELCA STATRLGEYG AIRSAPRLRE
ILSEAVTTDD QSAKSSAAHA LGDLRDVAAV PLLEKLATEH SDEWVGLQAI ASLGLIGNSE
AESALGRLHQ LQKGDGIEDH IFEALLCCGS PTAVAEVIKH ASSRLDGSEW LCERLGRLSW
MRGWRCGEYY THIYTAELVD YLKSHCKLGS PEKNWDIGDA FRQIDSPEVR TLLQKWGNRR
GSPEDAVVRE SDQRRLSDMC YWELRNRGDI SAISYTLDEC ADDRDDIYVA RAALLLQTFP
TAAVANQLQS RLNVATTISE TLRMLALLGR FGQQADAELA AKFVNHANDL VANVACETML
RLSDPLLVPG RWREM
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