| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0680 |
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| Symbol | |
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| ID | 9137361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 888892 |
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| End bp | 890334 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate/D-alanyl-D-alanyl ligase |
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| Protein accession | YP_003628726 |
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| Protein GI | 296120948 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0857615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGAC ATCCGCTTGA AGTTCTGGCA ACGATCCTTT GCGGGACAAT TCTGGGTGAT
CAGCGAACTG TCGCTGCCGC GGAAAAGAAA TTCTCGGGCC GGGTATCGAT CGATTCGAGA
AAGCTCAAAG AAGGAGATCT GTTTCTCGCT CTGTCAACGG GTCAGCGGGA TGGGCATTTG
TTCTTGAGTG ATGCCGCGAA GGCTGGTGCC GCTTTTGCCA TTATTGAACG TCACTTCGAG
GCGGAGTTCG CTTCGCTCAA GTTATCGATG CCGGCTGTGG TAGTGGCAGA TTCGGTTCTG
GCTTTGCAGT TACTCGCTGC GAGTCATCGC GATGAGTTTG ATGGCCTGGT CGTGGGCATT
ACCGGGAGCG TGGGAAAAAC GAGTACACGT TCGATGCTCT ACGAAGTGTT GCAGGCCAGA
TACTCGGGTC GGCAAAGCCC GGCGAATTTC AACAATACAC TGGGGTTGCC GTTATCAATT
CTTGAACTTG AATGTACTCG GGATGAGTTT GCAGTTCTTG AAATGGGGGC CGGCCAGCGA
GGGGATATTG CGCGACTGTG TGAGATCGCC CAGCCCGAAA TGGGTGTCAT CACCTCGATT
GGTCTGGCTC ACCTGGCAAC GTTTGGGACA CCGCTCAGCG TGGCCGAATC GAAGGCAGAA
CTGTTTGAAT CGTTGCCGGA AAATGGAGTG GCATTCTTTC CGGGGCATGA TCCATTTGCT
CTGGTTCTGA AAGATAAGGC CCATTGCCGT ACGGTGACTG TCGGTGAAGA TACCGTCAAC
GACTGGACGA TTCAGCAGGT TCGTGCTGTC AGGGATGGCT ATCGATTTGT GATGGATGGC
CAGGACTACT TCATTCGAAC GGTCGCCCGC CATTTTGTTC AGAATGCAGG TCTGGCGATT
GCCGTGGGGC GTGAAGTGGG AATCTCGAAT GCCGAGATCG CCGATCAATT GGCGAAGTGG
CAGCCTGTGA GTGGTCGCTG TTCGCTGATT CCACATCCAT CACTGACGAT TCTGGATGAT
TGCTACAATG CGAGCCCTTC GGCCATGGCA GCGGCTCTAC GCACATTAGA AGAGCTGGGA
GAGCGCGAAG AAACCCGTAC CATCGCAGTG CTGGGCGATA TGGCCGAGTT AGGTGAGATC
AGTGAGCGGG AACACCGTCG TGTGGGACAA TTGGCTGGCG GGCTTTCGAT CGATTTTATC
CTGGCTGTGG GCCAGCATGC AGACCTGATT GCTAAAGCGG CCAAGGCGAC GAATCTTTCA
TTACATCGGT TGGCTGTCGC TCGAGATGTT GAAATGGCGT GGATGCTGCT GGAATGCTGG
ATCGAAGAGG GCGATGTGAT TCTTGTGAAA GGGTCACGTT CGATGGGGCT GGAACGAATT
GTCGAGAACC TGCGATCATT TCAACCCGCA GTCCGAGACC GATTCCATCG ACTTTCGGCA
TGA
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| Protein sequence | MKRHPLEVLA TILCGTILGD QRTVAAAEKK FSGRVSIDSR KLKEGDLFLA LSTGQRDGHL
FLSDAAKAGA AFAIIERHFE AEFASLKLSM PAVVVADSVL ALQLLAASHR DEFDGLVVGI
TGSVGKTSTR SMLYEVLQAR YSGRQSPANF NNTLGLPLSI LELECTRDEF AVLEMGAGQR
GDIARLCEIA QPEMGVITSI GLAHLATFGT PLSVAESKAE LFESLPENGV AFFPGHDPFA
LVLKDKAHCR TVTVGEDTVN DWTIQQVRAV RDGYRFVMDG QDYFIRTVAR HFVQNAGLAI
AVGREVGISN AEIADQLAKW QPVSGRCSLI PHPSLTILDD CYNASPSAMA AALRTLEELG
EREETRTIAV LGDMAELGEI SEREHRRVGQ LAGGLSIDFI LAVGQHADLI AKAAKATNLS
LHRLAVARDV EMAWMLLECW IEEGDVILVK GSRSMGLERI VENLRSFQPA VRDRFHRLSA
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