Gene Plim_0662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0662 
Symbol 
ID9137342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp858937 
End bp860580 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content55% 
IMG OID 
Productcarboxyl-terminal protease 
Protein accessionYP_003628708 
Protein GI296120930 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCATCCAC CATTTGGACT GCGCTCAAAT TCCGTTTGGA CTTATCTCGC ATTTCTGGCA 
TTGGGCTGGT CCGTGGCATT CGCCCCGACG GCTCAAGCAA CAGAAAGCGA ACCAGCCACT
GAGAAAGCCG CCATCGAGCG CGCGGCTGAT TTCGAAAGAA GTCGACAGTG GGTGGACGCC
ATCGGCCTGT ACGAGAAGGC CCTCAAACAG TGGCCAGAAA ATCCCCAGCT CAAATACGGC
CTCAGACGAA CTCGCATTCA GTTCTCGGTC GATCGTCGCT ATGCCGACAA AAGCTATACC
GACGGACTGA CCGCCTCATC ACTCGACGAA TCGCTAGTCT TCCTCGATGA CGCACTGCTC
AAAGTTCGCA AATACTATGT TGATACGATT AGCCCCACTG CATTTATCGC CCACGGCACA
GAGAGTCTTT ACGTCGCTCT CACCAACGAA AAATTTCTCG CGAAGAATGT CTCCTCCGCC
TCGCAAAGAT CCATTGGTGC CTTCCGTGCC ATGCTTCGTG ATCGCTACTG GAATCGTCCT
TGTAGCAGCA TGGAAGAAGC CCGCATGGTT GTGACCGAAG TCGCACGCTC TGCCTATTCC
GAACTGCGAA TCGCGCCCGG TGCGATTGTC ATGGAGTATG TCTTCGGTGG CTGCAATGCC
CTTGATGAAT ACAGCAGCTT CCTGACACCT GGCCGCCTGG ATGATCTCTA CAGCAATATC
GAAGGTGAAT TCGTCGGGAT CGGCATTGAA ATGAAGGCCG AAGCTGGTAA AGGGATGCTG
TTGATCAACG TCCTCAGCGA GAGTCCAGCC GAAGAAGGTG GTGCTGCCCC GGGCGACTAC
ATCGTCGCGA TTGATGGGAT CAACTGCCTC AATATGAGTA CTGAAGAAGC AGCCCAGCAT
CTGCAGGGAA CTCCCGATAG CCGTGTGCGT CTCGATCTGA AAAATCCACG CACAGAACAG
ATCCGCCAGA CCGAGCTGAG CCGCCGGGCC GTTAAGGTGA AGAGCATCCC CATTGTGCGA
ATTGTCGATC CTGCGAACGG GATTGGCTAC ATCAAGATGA CTGGCTTCCA GAAGAACTCA
GCCGCTGAAC TCGATGCGGC ACTGAAAGAT CTCCGCAGCC AGGGAATGCA GGCGCTCATC
TGGGATTTGC GAGGCAACCC GGGTGGTCTC CTGACAGCGG CTGTCGAAGT TCTCGACCGC
TTCCTTGATG ACGGTATGAT TGTTTCCACC AAAGGTCGCA CACAGGATCA AAACTGGAGC
TACACCGCCA CTCGCGGTAA TGATTGGAAT GTTCCACTCG TCATTCTTGT CGACGGCGAT
AGTGCGAGTG CCAGCGAAAT TGTCGCCGGT GCCATTCACG ACCATGGCCG CGGTGTGCTG
GTCGGCCGCA AAACCTATGG CAAGTGGAGC GTCCAAAGCA TTCTTCCCGG TCGAGCTTCG
ACAGGTCTTC GGCTCACAAC GGCCAAGTTC TACTCGCCCA ATGGCAACAC TTACGGAAAA
ATTGGTGTTG AACCCGATGT CCAAGTGCCA GCAAGTTCAG AACAGTTAAC CGCCTATCGC
GGCCTGCGAA ATGAAAATCC CGAAGACGAT CAGGATCTCG CGGCAGGGAT GAACTCCCTA
CGCAGGCAAC TCGCCCGCAG GTAA
 
Protein sequence
MHPPFGLRSN SVWTYLAFLA LGWSVAFAPT AQATESEPAT EKAAIERAAD FERSRQWVDA 
IGLYEKALKQ WPENPQLKYG LRRTRIQFSV DRRYADKSYT DGLTASSLDE SLVFLDDALL
KVRKYYVDTI SPTAFIAHGT ESLYVALTNE KFLAKNVSSA SQRSIGAFRA MLRDRYWNRP
CSSMEEARMV VTEVARSAYS ELRIAPGAIV MEYVFGGCNA LDEYSSFLTP GRLDDLYSNI
EGEFVGIGIE MKAEAGKGML LINVLSESPA EEGGAAPGDY IVAIDGINCL NMSTEEAAQH
LQGTPDSRVR LDLKNPRTEQ IRQTELSRRA VKVKSIPIVR IVDPANGIGY IKMTGFQKNS
AAELDAALKD LRSQGMQALI WDLRGNPGGL LTAAVEVLDR FLDDGMIVST KGRTQDQNWS
YTATRGNDWN VPLVILVDGD SASASEIVAG AIHDHGRGVL VGRKTYGKWS VQSILPGRAS
TGLRLTTAKF YSPNGNTYGK IGVEPDVQVP ASSEQLTAYR GLRNENPEDD QDLAAGMNSL
RRQLARR