Gene Plim_0655 details

Gene Information

• Locus tag: Plim_0655
• ID: 9137335
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 848734
• End bp: 850788
• Gene Length: 2055 bp
• Protein Length: 684 aa
• Translation table: 11
• GC content: 59%
• Product: Pericardin like protein
• Protein accession: YP_003628701
• Protein GI: 296120923

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.541208
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATCAGA AATTTTCATG GACTTTGGCG GTTTCGCTAT CGCTGGCATC GCTCTCGCCC 
GTCTGGGCGA TTGGTGGTCG AGGTGGCGGT GGCGGTGGCA ATCGGCCAAA TATCTCGCGA 
CCTTCTGGCG GTGGTGGGGG GGGAGCAGCA GCAGCCCGGC CATCCATGCC CTCCAGACCT 
GCTGCACCGA CGGCGAGGCC CAGTGCGCCA GCGGCCCGGC CCAGTGCACC AGCAGCGAGG 
CCTAACCTGC CGACCGCCAG ACCGAATACG CCAGCGGCCC GTCCATCACT TCCGGCCAAT 
CGGCCGAATT CGTTGCCATC GGGTGGGATC TCCAGACCTT CAGGAAACAA TCGCCCCACG 
TTACCGACAA CAAGGCCGAC AGCGCCGACA TTGCCCACGA CGAGGCCTGG GGCAGGTGGT 
GGTGCAGCCC AGACACGCCC GACGCTGCCT CAAACCCGAC CATCACTTCC GGAGAACCGT 
CCGGGCGTTG GGACCGGGAT TGGCAATCGC CCCGAAGTTG GTGGCAACAG GCCTTCCATC 
AATCGCCCCG GGACATCAAA TCCGGGAACC ACACTTCCCG GCGGCATTGG AAACATTGGT 
GGAAATCGTC CCGGAGTAAC TCGTCCTTCA CTGCCTGAAG GGGGGATCAA TCGCCCCGGT 
ACGACGCGAC CTGATATCAC CAGACCTGAG ATCACTCGTC CTGGAACAGG GCGTCCGGAG 
ATCTCTCGCC CAGACATTTC TCGCCCAGAC ATTTCTCGAC CGGGCATTTC TCGTCCAGAG 
ATTGGGGGCG GGGCAGGCCG TCCGGGTGTG GGTGGGGTCA CACGCCCGAC GCCGGGGGAT 
CTGGGTGATT TTCTGGGCAT GCAACGGCCT ATCCGACCAA CGGAACCTCC CGTACGCCCA 
TTACCAGATC GACCCGGGAT TGGAGATCGG CCAGGTATTG GAGATCGACC CGGTATTGGA 
GATCGACCCG GTATTGGAGA TCGGCCAGGT ATTGGAGATC GACCCGGTAT TGGCGATCGC 
CCTGGTATTG GAGATCGCCC TGGGATTGGA GATCGGCCCG GTATTGGAGA TCGCCCAGGT 
ATTGGAGATC GCCCCGGGAT TGGAGAGCGA CCCGGGATTG GAAACGGTCA ACGGCCAGAC 
TGGAGTCGAC CTGAAGACAG GCCACGTCCG GGACGTCCAG GTGATATTAA CATCAACAAC 
CGCCCGAGCT GGGTGAACAT CAATAACAAT CAGATCAATG TGATCAGAAA CAACTGGGGG 
AATGCGATCA GGCCCTTGCC AGGTCAGCCC GGCATGGGGA ACTGGCTCAA TGATCACCCT 
AACCGCCGAG ATTATTGGAA TAGTTGGGGC GGTAGTGTTC GTTCATCGTG GAGATACAAC 
GGTTTTCACA GAAACTGGTA TGGCCCCAAC TGGTGGGTGA GTCATCCTCA TGGCTGGGGT 
GGTTGGCATT TTCATCGCTG GAGTGTCTGG CAAAGCCCGA GTTTCTGGTG GCGAGTGCCT 
GTCTGGACGA CCTTTGCCAC ATGGTTCACC TGGAGGCAGC CTCCTCCCGC CGTCGTGTGG 
TCACAGCCAG TCTTCTTTGA TTATGGGACG GGTGGAAATG TGGTGATCAA CTCGGATTCC 
GTGTTGATCA ATGGTCAGGT GGTGGCGACA CCGGCTGAGT TTGCAGAAAG TGCTGCAGTT 
CTGGCGACAG TCCCGGCACC GGCCAATGAC GAAGAGGCGG CAGCGATGGA ATGGATGCCA 
CTGGGGACAT TTGCCATTTC GACAGACCGC GATGACAAGA GCCCTTCACT CAGTATTCAA 
CTGGCTGTGA CACGCACGGG GATCATCGGT GGAACGCTCT TTAACGCAGA GACCGATGAA 
GCAACATCTG TGCAGGGTCA GGTTGATTCT GAGACGCAAA GAGTGGCCTT CCGCATTGGC 
ACCACGGATG ATCTGGTGAT CGAAACCGGA CTTTACAACC TCACTCAGAA TGAAGTCCCC 
GTGTTGGCTC ATTTTGGAGT TGAGACGACC GAAAACTGGC TCATGATTCG GCTCGATCCA 
CCAGAAGATG AGTAA 

 

Protein sequence

MYQKFSWTLA VSLSLASLSP VWAIGGRGGG GGGNRPNISR PSGGGGGGAA AARPSMPSRP 
AAPTARPSAP AARPSAPAAR PNLPTARPNT PAARPSLPAN RPNSLPSGGI SRPSGNNRPT 
LPTTRPTAPT LPTTRPGAGG GAAQTRPTLP QTRPSLPENR PGVGTGIGNR PEVGGNRPSI 
NRPGTSNPGT TLPGGIGNIG GNRPGVTRPS LPEGGINRPG TTRPDITRPE ITRPGTGRPE 
ISRPDISRPD ISRPGISRPE IGGGAGRPGV GGVTRPTPGD LGDFLGMQRP IRPTEPPVRP 
LPDRPGIGDR PGIGDRPGIG DRPGIGDRPG IGDRPGIGDR PGIGDRPGIG DRPGIGDRPG 
IGDRPGIGER PGIGNGQRPD WSRPEDRPRP GRPGDININN RPSWVNINNN QINVIRNNWG 
NAIRPLPGQP GMGNWLNDHP NRRDYWNSWG GSVRSSWRYN GFHRNWYGPN WWVSHPHGWG 
GWHFHRWSVW QSPSFWWRVP VWTTFATWFT WRQPPPAVVW SQPVFFDYGT GGNVVINSDS 
VLINGQVVAT PAEFAESAAV LATVPAPAND EEAAAMEWMP LGTFAISTDR DDKSPSLSIQ 
LAVTRTGIIG GTLFNAETDE ATSVQGQVDS ETQRVAFRIG TTDDLVIETG LYNLTQNEVP 
VLAHFGVETT ENWLMIRLDP PEDE