Gene Plim_0653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0653 
Symbol 
ID9137333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp845843 
End bp847138 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003628699 
Protein GI296120921 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.379776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCTGG CAATTTTTGA AAACTCCGCT TCATCAGCTC TTGAGCCACT CGTCTGGGTC 
CGTCCCGTGT TCGAGTTGCT GACAGGCCAC TTTTCCACAC GTGAACGCTG GCTGAAAGTT
TTGCAGCCGG ATGAATGGGG GGCGATTATT CGTCCGCACC TTCTCGAAAC GTATCGCGAA
TCCCATCCCG ATGCTTACGT CAATGATGCC CGCTGGCTGG CTGGTGGTCA CACACTGTTG
CTGAATGGTC AATGGCTCTG CAATCCCGCA GAAGTCCCGG AATTCAGCGA TGAATCTGTG
GGAATCGTCG ATGGAGAAAT CGCCTGGCTA GTTTGCGATC CACTCGAAGC CACCTTGCTA
CTCGATCATC ACCTCGACGA ATCGCTCGTC CGGCTGGCTC AATCTCGCAA GCGAGTCGTC
TCACCCGGAA AGATCCTGCG AAGACCATGG AATCTGGTCA ATGAGAATGA GCAGCAGATC
TGTGAGGATC ATGCCTTCCG ACAATCATCC TCAAGTGAAC TGAAAGCTCA TCCAAACCAG
ACCTTCACAA TCGTGGGGCC AACGCAAGCG CTGTGGGTTC ATGAATCTGC CAAAGTCGAT
CCTTTTGTCG TCTTCGATAC GACGGGTGGC CCCATTTACA TCGACCGCGA TGCCGTCATT
CAGGCGTTTA CCCGTATGGA AGGCCCCTGT TATGTTGGCC CGGGGACTCA ACTTTTCCGT
ACGAACCTCC GCGCGGGTAC CAGTTTTGGC CCCATGTGCC GGGTGGGTGG AGAGATCGAG
AATTCCGTCT TCCAAGGCTT CTCGAACAAG TACCACGATG GCTTTCTGGG CCACAGCTAT
GTCGGCTCGT GGGTGAATCT GGGGGCCATT ACGACCAATA GCGACTTGAA AAACGATTAC
TCGAATGTCT CCGTCCCCAT TGGTGGCACA TCGATCGCAA CGGGTGAGAA AAAGGTGGGC
TGCTTTCTTG CCGACCACGT GAAAACGGGT CTGGGGAGCA TGTTCAATAC GGGAAGTGCC
GTGGGCGTGA TGAGTATGAT TCTCCCGGCG GGCGAACTCC TCCCCAAACA TATTCCCTCG
TTTACCCGAT TCTGGCACGG AGAGATCGAA GAGCTATCCA GCATCGAACC CCTGCTCGAA
ACGGCAGCCA TTGCCATGAG CCGTCGTGGC GTAGAGTTTT CGATCGCTCA GGAAAGAATG
CTTCGATCTG TCTGGCATGC CACGAAACCC GAACGCCAGA AAGCCCTGGC ACGCCAGTCG
TCTCGATCAA TCGAAACTTC CAGACAGAAC CAATAG
 
Protein sequence
MRLAIFENSA SSALEPLVWV RPVFELLTGH FSTRERWLKV LQPDEWGAII RPHLLETYRE 
SHPDAYVNDA RWLAGGHTLL LNGQWLCNPA EVPEFSDESV GIVDGEIAWL VCDPLEATLL
LDHHLDESLV RLAQSRKRVV SPGKILRRPW NLVNENEQQI CEDHAFRQSS SSELKAHPNQ
TFTIVGPTQA LWVHESAKVD PFVVFDTTGG PIYIDRDAVI QAFTRMEGPC YVGPGTQLFR
TNLRAGTSFG PMCRVGGEIE NSVFQGFSNK YHDGFLGHSY VGSWVNLGAI TTNSDLKNDY
SNVSVPIGGT SIATGEKKVG CFLADHVKTG LGSMFNTGSA VGVMSMILPA GELLPKHIPS
FTRFWHGEIE ELSSIEPLLE TAAIAMSRRG VEFSIAQERM LRSVWHATKP ERQKALARQS
SRSIETSRQN Q