Gene Plim_0647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0647 
Symbol 
ID9137327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp839690 
End bp840712 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content56% 
IMG OID 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_003628693 
Protein GI296120915 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCCCGG TGAAGGTTGG CATCAACGGT TTTGGACGTA TTGGGCGTGT CGCATTTCGT 
GCAATGGCAG CCCGCCCGGA AGAATTTGAA ATTGTCGCCG TCAACGACCT GGGTAAGCCT
GATTCTCTCG CTATGCTCCT GAAGTACGAC AGCGTTCATG GCCGATTCCC TGGAACTGTG
GAAGTCGATG GCGACTCAAT CGTCGTCAAC GGCAAGAAGG TCAAAGTGGT CGCTGAACGC
GATCCCCGCC AGCTTCCCTG GAAGGCAATG GGCGTCGAGA TCGCTCTCGA GTCGACTGGT
TTCTTCACTG CTCGTGCGAA GGATGGAAAG CCTGGTTACG ACAGCCATCT GGAAGCTGGT
GCCCGCAAGG TCATTCTTTC TGCACCTGCC AAGGATACAC CTGACCTGAC CGTCGTGGTG
GGCGTCAACG ACAATCAGCT CACTCCCGAG CACAAGTGCA TCTCGAATGC CAGTTGCACC
ACCAACTGCC TGGCTCCCGT GGCGAAGGTG CTGCACGAAA ACTTTGGCAT CGTCAAGGGT
TTGATGACCA CTTGCCACGC CTACACCAAC GACCAGCGTC TCGCTGACCA GTTGCACGAT
AACATTCATC GCTCACGAGC TGCCGCCGTG AATATTATCC CCACATCGAC CGGTGCCGCT
AAGGCCGTCG GTGAAGTTCT GCCAGAACTC AATGGCAAGC TGACCGGGAT TTCGCTGCGA
GTCCCTGTGC CTTGCGGCAG CATTACCGAC CTGGTCGCCG AACTTGGCAA GGACGTGACT
GTTGATGAAG TGAATGCTGC TGTGAAAGCT GCTGCCGAAG GCCCGCTGAA GGGAATTCTG
CAGTACAACA CCGATCCCAT CGTTTCGAGC GATGTGATTG GTAATGCTCA CAGCTCGATT
TTCGACGCTC CCTGGACCAT GGTTCTCCAG AAGCGGATGA TCAAGATTCT GAGCTGGTAC
GACAACGAGT TTGGCTATTC CAACCGGACA GCCGACCTCA TTGCCAAGGT TGCCAAGCTC
TAA
 
Protein sequence
MAPVKVGING FGRIGRVAFR AMAARPEEFE IVAVNDLGKP DSLAMLLKYD SVHGRFPGTV 
EVDGDSIVVN GKKVKVVAER DPRQLPWKAM GVEIALESTG FFTARAKDGK PGYDSHLEAG
ARKVILSAPA KDTPDLTVVV GVNDNQLTPE HKCISNASCT TNCLAPVAKV LHENFGIVKG
LMTTCHAYTN DQRLADQLHD NIHRSRAAAV NIIPTSTGAA KAVGEVLPEL NGKLTGISLR
VPVPCGSITD LVAELGKDVT VDEVNAAVKA AAEGPLKGIL QYNTDPIVSS DVIGNAHSSI
FDAPWTMVLQ KRMIKILSWY DNEFGYSNRT ADLIAKVAKL