Gene Plim_0640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0640 
Symbol 
ID9137320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp827865 
End bp829106 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content59% 
IMG OID 
Productaminotransferase class V 
Protein accessionYP_003628686 
Protein GI296120908 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGCAG CCCTGGGCAA GCATGCCCAG GCAAACAAAC CTCAGCCATT CCTCAAACAA 
GCCTTTCACA AACCATCAAC TATCAACCAA CAAACACCAA ACTCCTCCAT GCCCCGACTT
TACTGCGACA ACGCCGCCAC CAGCTTCCCC AAAGCCCCCG GTGTCGCCGA AGCCATGCTC
AAGTACCTCA CCGAATGCGG AGCTCCCGCC GGCCGAGGCG CCTACCGCTC TGCTCTCGAA
GCCCAATCGA TTATCGATCA GTGCCGCCTC AAAGTCGGTC GGTTCTTCAA TGCCCCTCCC
GATCGCTTCG TCTTCACCCT CAACTGCACC GATAGTCTCA ATCTCGCCAT TCGCGGCTTG
CTCAAGCCCG GCGACCACGT CGTCACCACT CTGCTCGAGC ACAATTCCGT CCTCCGCCCC
CTCGCCTGGC TCCAACAAAC CCTCGGCATC ACCCAGACCC TGCTCACTCC TAACCAGCAA
GGCTGGATTG AACCTGCCGA TCTCCGCGCT GCACTCAGGC CCCATACCCG GCTCGTCATC
ACCACCCACG CCAGCAACGT CACCGGCGTC ATTCAGCCCA TCGACGACCT GGGCACAATC
TGCCGGGAAG CGGGCGTTAT CTATCTTGTG GATGCCGCGC AAACCGCCGG GATTCTCCCG
CTGGATATGT CCTCCCAGCC TGTGGATATC CTTGCCATGG CGGGGCACAA AGGCTTGAAG
GGCCCTCTGG GAACCGGCCT GCTTTACATT CGAGCGGGCC TCGATGAAGA AATTTCCCCC
TGGCGATTGG GCGGCACAGG CCTCGCCAGC GAAGATCTCG CCCCACCCAC CGCCGGGCCC
GCCAGGTTCG AGGCCGGCAA TCAGAATCTT CCCGGCATCG CCGGACTTTC CGCCGCCCTG
GATTGGTTAG CCGGGCAATC ATTGAAGGAA ATTCAAGAGC GCGAGCAATT TTCACGCTTA
GGCTGGCAAA TTGCTCTTTC CACATTTCCG GGAATTCGGC TAATTTTGCC AGAGAGTTCC
AGCGTGAACA TTTTGAGCGT GACGGCGGAA GGATTCTCGC CGCACGATTT AGCAGTCATT
TTTGAACAGG AATACGGCAT GGAAGCCCGC CCCGGCCTAC ACTGCGCCCC CCTCTGCCAC
CAATGGCTAG GCACCCTCCC CACCGGCGGC ACACTACGCG TGAGTGGTGA GTGCGTTCCT
CGTGATGATG AACATCTGAA GTTCCACAAT TTAAGCCGAT GA
 
Protein sequence
MLAALGKHAQ ANKPQPFLKQ AFHKPSTINQ QTPNSSMPRL YCDNAATSFP KAPGVAEAML 
KYLTECGAPA GRGAYRSALE AQSIIDQCRL KVGRFFNAPP DRFVFTLNCT DSLNLAIRGL
LKPGDHVVTT LLEHNSVLRP LAWLQQTLGI TQTLLTPNQQ GWIEPADLRA ALRPHTRLVI
TTHASNVTGV IQPIDDLGTI CREAGVIYLV DAAQTAGILP LDMSSQPVDI LAMAGHKGLK
GPLGTGLLYI RAGLDEEISP WRLGGTGLAS EDLAPPTAGP ARFEAGNQNL PGIAGLSAAL
DWLAGQSLKE IQEREQFSRL GWQIALSTFP GIRLILPESS SVNILSVTAE GFSPHDLAVI
FEQEYGMEAR PGLHCAPLCH QWLGTLPTGG TLRVSGECVP RDDEHLKFHN LSR