Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0613 |
Symbol | |
ID | 9137293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 793275 |
End bp | 794135 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | endonuclease III |
Protein accession | YP_003628659 |
Protein GI | 296120881 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCAAAG GTCGGGAATC GAAGCAAGCT TTCATCGACA GAACCGGGCG GATTCTGGCT CAGCTGGAGC GGACTTACCC GGATGTTGAA TGTGCTCTCG AACATACCTC GCCGTATGAA CTGCTGGCAG CCACAATTCT CAGTGCGCAG TGTACTGATG AGCGAGTGAA TATGGTCACG CCTGGGCTGT TTAAGGCGTA TCCAACGCCC GTTCATCTGG CCAAAGCCCG GCAGGAAGAT GTCGAAGCGC TTGTGAAATC AACCGGTTTC TTCCGCAATA AAGCGGCCAA TCTGATTGGT ATGGCCCAGG CCGTCGTGGA AAAGCATCAG GGAGAGATTC CTCAAGCACT GGAAGAGCTG GTCGCGCTGC CGGGAGTGGG AAGAAAAACC GCCAATGTTC TCCTCGGGAC ATTTCACGGC GTACCAAGTG GTGTGGTCGT CGATACTCAT GTGCAGCGCA TCAGTCGTTT GTTAGGGCTA GCCAAAGGCA ATAATGCCGA AACGATTGAA CGCGAACTGA TGGCCATTGT TCCACAGCAC GAGTGGATCA TGCTCTCCCA CCGCCTGATT CATCATGGTC GACAGATCTG CATCGCCAGG CGGCCGCAAT GCACACGTTG CCCTTTACTG GCAGACTGTC GTCGTGTGGG TTTGCCTGAG CTGGAAATGC CGACTTCTGT GCTCGACGAT CCTGCAGAAC CTCAGGAAAC TCGTCCCTCA AAGAAGCCAT CCCGAGGCAA GAAGACAATG ACCAAAGGCA CACCTTTGAA AGGCACTCAC AAGGCGACCA CGACCACCAC ACCTTTGGTT GCAAAGAGCA AGAAAAATAT CGCAAAAACC CAGAATCGTA ACGGGCACTG A
|
Protein sequence | MAKGRESKQA FIDRTGRILA QLERTYPDVE CALEHTSPYE LLAATILSAQ CTDERVNMVT PGLFKAYPTP VHLAKARQED VEALVKSTGF FRNKAANLIG MAQAVVEKHQ GEIPQALEEL VALPGVGRKT ANVLLGTFHG VPSGVVVDTH VQRISRLLGL AKGNNAETIE RELMAIVPQH EWIMLSHRLI HHGRQICIAR RPQCTRCPLL ADCRRVGLPE LEMPTSVLDD PAEPQETRPS KKPSRGKKTM TKGTPLKGTH KATTTTTPLV AKSKKNIAKT QNRNGH
|
| |