Gene Plim_0607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0607 
Symbol 
ID9137287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp785409 
End bp787055 
Gene Length1647 bp 
Protein Length548 aa 
Translation table11 
GC content59% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003628653 
Protein GI296120875 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCGAT ACAGTTGGGT TTGTCTCGTC GCAGCCGTAG TTGGCGCGAC GGTCGCGGAT 
GAATGCCACG CACGTGGCTT TGGTGGCGGC GGTGGTGGTG GATTCCGCGG CGGCGGAGGG
TTTGGCGGTG GTGGTGGCGG CGGCTTTGAT CGAGGCGGTG GTGGCGGCGG CTTTGATCGA
GGCAGTGGTG GCGGAAGTTT TGGCGGCGGA GGTAGTTTTG ATCGCGGCAG CTTCGGTGGC
GGCGGAAGTG GAAGTTTTGG CGGTGCTGGT GGCTTTGACC GTGGAGGCAT GGGCAGCCAG
GGTCTGGGCG GTGGAAGTTT CGATCGTGGA AACGTGGGTG GCCAAGGTCT CGGCGGTGGA
AGTTTCGATC GTGGAAACTT TGGCGGCGAT TCCTTCAACC GGGGCGATCT GGGAGGCTAC
GGCAGCGCTC CTTCCCGGAG TTCTTTGAAC AGTTTTCTCG GACTCCCTTC CGATGAAGGG
ATGCATGGAC TCAGTTCCTC TGGTGGTTTC GGCAGCAATG CCGACGTCAA TCATGCATCG
TATGAAGGGC CACGTGGTAC CACTGCCAGT GGCACCACTG TCACTGGGCC GGGCGGTAAC
ACTTACGGCC GTGGAGCTGT TGAAGGCCCC AATGGTGGAG TTGCCGCTGG CCGTGGTGTT
GAAGGTGCCA ATGGAGGTGC AGCAGCCCAG GGAATTGCCG TTGGACCGAA TGGTGGCGTC
GCTGCGGGTG GTGCGGTCCG AGGGCCGGGC GGTACTGAAG CAGCTCGCGG AGTTGCTGTC
GGGCCTAACG GCACCGTAGC GGCTGGCGAT GCCGTTCGCG GGCCCAATGG AACAGTAGCC
GGTCGCGGGG TTGTTGCAGG GCCCGATGGT GTCGCCGCTG GCCGCTTTGT TTCAGGCTAC
ACGCCCATGT CGCCCACTGG ACGGTATACC ACCGCCTATG GATGCCGTAA CAGTTTCAAC
AACTACAACT ATTACGGCTC TGGCTGGTAC GGCGCTCATC CGGGAGCCTG GGCAGCCGCA
GGTTGGGCCG CTGGTGCCGC CTGGAGTACT GCCACCTGGG GCTTGGCAGC TCCTTATTGC
GGGTTCTACG ATGTTCCACC CGTCTACTAC GATTATGGCA ACAACGTTGT CTACCAGGGT
GGACAGGTCT ATGTGAATAA CCAGGATATG GGAACGTCGG CTGATTACTA CAATCAGGCC
TCGAACCTCG CCAATACAGG CAGTCAGCTT CCCGTGACGA ATCAGGGCGA TTGGCTTCCT
CTGGGTGTCT TTTTGCTCTC GATGAGTGGG CAGACCAATT CGACAACTTC AGTTCAACTG
GCTGTGAACA AAGCCGGCAT TATTCGCGGT AACTGGGTTG ATTCCAGCAC GAACAAAACG
CTCCCTATTT CTGGCGCTGT CGATATGCAG ACCCAGAAGG TGGCGTTTAC CGTCGGTTCG
GATACCAGCA CAGTGTACGA AACCGGACTT TACAACCTCA CCAAAGACGA AGCACCGGCT
CTGGTTCATC TTGGCAAAGA CAAGACCGAA CAGTGCCTTC TGGTTCGGCT GAAGAAACCT
CAGGGGGATG CTGCTGGCAA TCCCAATGCG ACAAGTGACG CCAGTTCCAA TGGTGTGCAG
ATCTCTCCCG GAAACTCAAA TCCCTAA
 
Protein sequence
MIRYSWVCLV AAVVGATVAD ECHARGFGGG GGGGFRGGGG FGGGGGGGFD RGGGGGGFDR 
GSGGGSFGGG GSFDRGSFGG GGSGSFGGAG GFDRGGMGSQ GLGGGSFDRG NVGGQGLGGG
SFDRGNFGGD SFNRGDLGGY GSAPSRSSLN SFLGLPSDEG MHGLSSSGGF GSNADVNHAS
YEGPRGTTAS GTTVTGPGGN TYGRGAVEGP NGGVAAGRGV EGANGGAAAQ GIAVGPNGGV
AAGGAVRGPG GTEAARGVAV GPNGTVAAGD AVRGPNGTVA GRGVVAGPDG VAAGRFVSGY
TPMSPTGRYT TAYGCRNSFN NYNYYGSGWY GAHPGAWAAA GWAAGAAWST ATWGLAAPYC
GFYDVPPVYY DYGNNVVYQG GQVYVNNQDM GTSADYYNQA SNLANTGSQL PVTNQGDWLP
LGVFLLSMSG QTNSTTSVQL AVNKAGIIRG NWVDSSTNKT LPISGAVDMQ TQKVAFTVGS
DTSTVYETGL YNLTKDEAPA LVHLGKDKTE QCLLVRLKKP QGDAAGNPNA TSDASSNGVQ
ISPGNSNP