| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0602 |
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| Symbol | |
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| ID | 9137281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 775627 |
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| End bp | 776982 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | RNA polymerase alpha subunit domain protein |
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| Protein accession | YP_003628649 |
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| Protein GI | 296120871 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.125598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGTCTT TGGAAGCGGT TGACGTTCGT GCAATTCTGA GTGGTAAGAA TTCCTTAAGT
GCTGACGATC TGGCTCAGCT TCGCCGGGCG ATTGCCGGTG ACCAGGTGGC TTCCACCCGA
GTTGAGTTGG AAGCCCTGAT CCGTGAAGTG GAAGCGGGCA AAGAAGATAT CGGGCCCGCT
TCACGTGCCG GGATTGGTGC GTGGCTGCTC GGGCAGCATG CGATTGCTGA CAAAATTCTT
TCCCGTTTGA CGACCGACCC TGTGGCCCTT TATGCCCATG GGCATGTTCT GCAAGCACTC
GATCAATTCG AGGCCGCTGC TGAAAAGTTC GCTGCTGCAG CAAAGGCTGG TTTCGACCCC
GTCGAATGTA CCCTGAAACG TGCCGGTGCC ATTCGTTTGG CTGGTCAGCT CGATGAAGCC
GAAAAAGCTG TCCGTCAATC CGGGACCGAA GGTGCCCGCC GCGCTGAGTA TTCGTATCAG
ATGGGCTGCA TTCTCTCAGA TCGAGGTGAC ACCTACGGTG CGATCGAGTA TTTCGAGCGT
GCTGTCGATA TGGATCCTCA CCACAGCCAG GCACTCTTCC GCCTTGCTGA ACAGAATGCT
CTCTACGGCA ACGACACTGA AGCGATTCGT TTGTACGAGC AGGCTCTTTC CCGTCCGCCC
TATCATCTTT CAGCTATGCT GAACCTGGGC CTTCTGTACG AAGACCGTGG CAACTACGCT
TCGGCTGCTT TCTGTTTCCG TCGGATTCTA GCCTTCGACC CCAATCATGT GCGTGCCCGC
ATGTACATGA AAGATATCGA AGCCACCCAG GAAATGTATT ACGACGACGA CATGGCTCGC
AACGAGGCCC GTATGGCACA GTTGCTCAGC CGTCCTGTCA CCGATTTTGA GCTTTCAGTT
CGTAGCCGCA ATTGCCTGGC CAGTATGGAT ATCCATACGC TGGGCGACCT GACCCGCGTC
AGCGAAAGCG ATCTTCTCCA GGGCAAGAAC TTTGGTGAAA CATCGCTGGT GGAAATCCGC
GATCTCATGC AGCAGCATGG CCTCAAAGTT GGCCAGAATC TGCAGCCCAC TAAGGCTCGC
GACGCCAGCT GGGCCGGGAT GCCAGCTTCG GCATTTGCTC CGATTGGTAA TGACCTTTCG
CCACAGGAGC AGGCACTGCT CAGTCGCCCA GTTTCCGATT TGAATCTCTC GGTGCGTGCC
CGCAAGTGTA TGGCCCGACT TCAGATTGGT ACTCTCGGCG AACTCGTGCA GAAGAGTGCC
GACGAACTCC TTGCTACCAA GAACTTCGGG GTGACGTCAC TGAACGAAAT TCGGGCTCAG
CTGACGGAAC ACAACCTCAA GCTTCGAAAC GACTAA
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| Protein sequence | MKSLEAVDVR AILSGKNSLS ADDLAQLRRA IAGDQVASTR VELEALIREV EAGKEDIGPA
SRAGIGAWLL GQHAIADKIL SRLTTDPVAL YAHGHVLQAL DQFEAAAEKF AAAAKAGFDP
VECTLKRAGA IRLAGQLDEA EKAVRQSGTE GARRAEYSYQ MGCILSDRGD TYGAIEYFER
AVDMDPHHSQ ALFRLAEQNA LYGNDTEAIR LYEQALSRPP YHLSAMLNLG LLYEDRGNYA
SAAFCFRRIL AFDPNHVRAR MYMKDIEATQ EMYYDDDMAR NEARMAQLLS RPVTDFELSV
RSRNCLASMD IHTLGDLTRV SESDLLQGKN FGETSLVEIR DLMQQHGLKV GQNLQPTKAR
DASWAGMPAS AFAPIGNDLS PQEQALLSRP VSDLNLSVRA RKCMARLQIG TLGELVQKSA
DELLATKNFG VTSLNEIRAQ LTEHNLKLRN D
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