Gene Plim_0565 details

Gene Information

• Locus tag: Plim_0565
• ID: 9137243
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 706253
• End bp: 708226
• Gene Length: 1974 bp
• Protein Length: 657 aa
• Translation table: 11
• GC content: 54%
• Product: hypothetical protein
• Protein accession: YP_003628612
• Protein GI: 296120834

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCATCGA TTCGAGAGCA GGATGCACCT CGGAAAAGCC AGGATGCACG GCGACAAAGA 
CTGTGCCGAT CACTGGAGAC GAACACAGAG ATCGCTCCTT CCACCGCAGA TCGCTTAGAG 
CGTGCTTTCA GACCTCAGCC AGTCGTCAGT CGCCGCCAAC ATCCACTCAT CCAGCGGCTC 
GTACAACTCA CGAGACAACC GCTGGCTTAC TGGATCTGGG CGACGGTATT GATCGGGATC 
TCGCTGCGAT TTCTTCGTTT TGCCATGGTT CGCCCTCTCT GGTGCGATGA AGCTTATCTG 
GCGACTTCAA TCCTTTCCCG TGACTTCAAG ACTCTCTTCA CGCCACTCGA ATATGGCCAG 
ATCGCTCCCA GTGGATTCCT GCTGGGGACA TGGCTGAATG TGGCCACCTG GGGTGCTTCG 
GAAGTTTCAC TGCGTACTCC CGCGATCATC ATGGGGGTGG CGGCACTGGC TTTTTTCCCC 
TGGGCGATCC GTCCTTTGGC CAAACGGGAA GTCTGCTGGG TCGCGACGGT GCTCCTGGCT 
GTCAGTATTT TTCCTGTCCG CCTGGCCAGC GAACTCAAGC CTTACTCCAT CGATCTTTGT 
CTTTCCGTAT TGCTTCTGGG CTGTGCAATC CGGTCTCTTG CAGATTCGTC GGTCAGACGA 
ACGTTGATCA AACCGCAGCA TCGAGGGAAC CATACCTGGT TCTGGTTTGG TCTCTTCGTG 
ATCTTGTGTG TGGCCACCCC CTGGATCTCA TTCCCGGGCG TTTTTGTCGC TGGTGGAATG 
ATTGTGGGAC GCTTTTTCTG GCAATTGTCG CCACCGCTTC CCAGACTTCC CGCAGGCTTG 
CTGTTGCAGA TTCCCGTCAA TGATCGATCC ACAATTACGC GCATTCTGCC TTATCACTTC 
GAATCCCGCT CCCTCCGCCT GCAACGGGCC TTGATGGGCG GTTTTCTGGT TGGCATCCCC 
CTGGTACTCA GTACGTTTCT CATGTGGAAC TGCTTTGGAA AGTCCGCTTA TGAGCATGGC 
AATCAAGTCA TGAATCTCAA GGTCTTCTGG CAGGATGCGA TGCCCCGCAG TTTCTCTGCT 
CAGGAAATTC TGCGCTGGCT GGCTGAAGCT CACACAGGCA GCATGGTGGC GTATCCTGTG 
GGTGCAGAGC ATGGTGGGAG TGCTGCGACC TCGATCTTTC TGGTACTCGG GATCGTTTTA 
CTGGCATTTC GACAGCGGCA GATTCTTCTT CTGCTTGTTT CGCCGTTTCT ACTGACAGCA 
CTGGCCGCTG CACTTCAGAA GTATCCCTAT GGGGGATCAG CTCGCATTGC CCAGCACCTG 
GCCCCGATGA TTTGCCTGCT GGTGGCCTGG GGTGTGATCG CCATCTTCCC GAGAACAACA 
ATCACTGGCA GACGACTTTG CCGCCTGCTG GTGGCTGTGA TCGGCCTGGG TTTTGTTGTC 
GGACAAGGGA TTTATTTCAT TCAGAAGCCC GCTAAAGATC CCAACGATAC TTCGATAAGA 
GAAACACTCG CCTCGATCTA TTTGCAGACT CCTATCACGC AATCAATCCG CTGTGCCGCT 
GATGATCATC ATGTGGCTTT TGCAGAGCAT CAACTCTGTT CTGAGCAAGG AGCCAAGTTC 
AGGGCTAACC GCTTACTTGA AGAAGCCAAT CGCAAGCAGC AGCTGAATTC CGTCGTTCCC 
ACCAGTGAAA AAGTGCTGTT CTTCAGCCAT CAGCCGATCC ATGAACTCTC TCCTGAGATT 
CAGCTCGAGT TAGCACAAGC CTTTCCATCG ACGATCTATA CACCATCCCG GACATACCCT 
CTGGTGCATT CGAATCGTGA TGGTCGGCAT GCGGGCTATT TCTTCACTTT TGAAAGAGCA 
CTTTCCGAAT TGCAGCCACC TGCCGTCGAT CACCCGTTGC CAGAAAGCCA TCCATCGTCT 
GGGCAGGACA ATCTGGATTT TGTCAGCAAC AGCAACTTCC CCCGTTTGCC CTAA 

 

Protein sequence

MSSIREQDAP RKSQDARRQR LCRSLETNTE IAPSTADRLE RAFRPQPVVS RRQHPLIQRL 
VQLTRQPLAY WIWATVLIGI SLRFLRFAMV RPLWCDEAYL ATSILSRDFK TLFTPLEYGQ 
IAPSGFLLGT WLNVATWGAS EVSLRTPAII MGVAALAFFP WAIRPLAKRE VCWVATVLLA 
VSIFPVRLAS ELKPYSIDLC LSVLLLGCAI RSLADSSVRR TLIKPQHRGN HTWFWFGLFV 
ILCVATPWIS FPGVFVAGGM IVGRFFWQLS PPLPRLPAGL LLQIPVNDRS TITRILPYHF 
ESRSLRLQRA LMGGFLVGIP LVLSTFLMWN CFGKSAYEHG NQVMNLKVFW QDAMPRSFSA 
QEILRWLAEA HTGSMVAYPV GAEHGGSAAT SIFLVLGIVL LAFRQRQILL LLVSPFLLTA 
LAAALQKYPY GGSARIAQHL APMICLLVAW GVIAIFPRTT ITGRRLCRLL VAVIGLGFVV 
GQGIYFIQKP AKDPNDTSIR ETLASIYLQT PITQSIRCAA DDHHVAFAEH QLCSEQGAKF 
RANRLLEEAN RKQQLNSVVP TSEKVLFFSH QPIHELSPEI QLELAQAFPS TIYTPSRTYP 
LVHSNRDGRH AGYFFTFERA LSELQPPAVD HPLPESHPSS GQDNLDFVSN SNFPRLP