Gene Plim_0554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0554 
Symbol 
ID9137232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp691883 
End bp693067 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content57% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003628601 
Protein GI296120823 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGCATC GAGCAACTCC ACTGGTGATG TTATTGACAT TGATCCTCGC GATATCTTCA 
GCTTCCGCAG AGCAGCGAGG GCGCGGTGGG GAAGGCGGCG GTGGAGATAA GTCGGGTGGC
GGCCGCCCGG GTGGATCAAG CTCTTCTGCA GAGAAATCTG GCAGCAAGCC GCCGGGTGGC
GCCTGGTCTT CACCTTCAGG TAAAAAGCCT GGCACCAGCC AGGGGGATTT GCCGGGCAAT
GAGGACAAGA AAAATCCTTT CAATGCCAAC AACCCACAGG GGGCCGCAGC GGCAGCTAAT
AAAAACAAAT CATCCAATCC GAGTGGTGCT GAAGATGCAG CCGCAGGTGC TGCCGCATCA
CGTCGAAATC AGCCCACGGC TTCTGGAGCG GAAGGCGCTG CCGCTGGTGC GGCTGCTGCC
AATAAAAATC AGCCGACAAT GTCCGGTGCC CAGGGAGCTG CTGTTGGCGC TACGGCAGCT
AAAAACAATC AACCAGCCGT ATCCGGCGCA GCGGGCTATG CAGCTGTGAG GGATTCCTTC
GATCATCCCA GCCTTTATAC ACCCGAATGG CATGGAGACA ATCAGGCGGC ATGGACAGCG
TCGAACTGGC CAGCCAATGC CGCCTATACC AACGCCAGCC ACGCGGCAGT GGCAGCGCAC
TGTGGCTACC AGACGAACGC TGCTGTCTCC TACGGATACG GCGACAACGT CAATTATGAA
AACCAGATGG TTGTCGTGAA TGGCCAGGTG GCAGGGAGTG CTGCAGCATA CAGTCAGCAG
GCAGCGCAAA TGGCCAACAA TGGACGAAAC GCGACGACAA CACCTGCTGA TGACTGGTTG
CCGTTGGGCG TCTTCGCCCT GGTTCCTTCT GAAGACCAGC AGCCTCAGTT GACAGTGCAG
CTGGCGATCA ACAAACAGGG AGTGTTACGA GGTAACTATA CAGAACTCGT TTCCGACCAC
ACTCAGCTGA TTCATGGAAT GGTTGATCCA CAAACACAGC GGGCTGCATG GACTGTCGGT
GATTCCGAGG GTTTCTATAT GGAAGCGGGC CTTAAGAATC TGACCGATGG TGATGCTCCC
GTTCTCATTC ATCGACGTGG CAAGACCGAA CGCTGGGTGC TCGTCAGTTT GCCTCAACCG
CAAAGTGCAG CAGCCAATTC CAACAATCCG GGAAATGGAA ACTAA
 
Protein sequence
MRHRATPLVM LLTLILAISS ASAEQRGRGG EGGGGDKSGG GRPGGSSSSA EKSGSKPPGG 
AWSSPSGKKP GTSQGDLPGN EDKKNPFNAN NPQGAAAAAN KNKSSNPSGA EDAAAGAAAS
RRNQPTASGA EGAAAGAAAA NKNQPTMSGA QGAAVGATAA KNNQPAVSGA AGYAAVRDSF
DHPSLYTPEW HGDNQAAWTA SNWPANAAYT NASHAAVAAH CGYQTNAAVS YGYGDNVNYE
NQMVVVNGQV AGSAAAYSQQ AAQMANNGRN ATTTPADDWL PLGVFALVPS EDQQPQLTVQ
LAINKQGVLR GNYTELVSDH TQLIHGMVDP QTQRAAWTVG DSEGFYMEAG LKNLTDGDAP
VLIHRRGKTE RWVLVSLPQP QSAAANSNNP GNGN