Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0554 |
Symbol | |
ID | 9137232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 691883 |
End bp | 693067 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003628601 |
Protein GI | 296120823 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGGCATC GAGCAACTCC ACTGGTGATG TTATTGACAT TGATCCTCGC GATATCTTCA GCTTCCGCAG AGCAGCGAGG GCGCGGTGGG GAAGGCGGCG GTGGAGATAA GTCGGGTGGC GGCCGCCCGG GTGGATCAAG CTCTTCTGCA GAGAAATCTG GCAGCAAGCC GCCGGGTGGC GCCTGGTCTT CACCTTCAGG TAAAAAGCCT GGCACCAGCC AGGGGGATTT GCCGGGCAAT GAGGACAAGA AAAATCCTTT CAATGCCAAC AACCCACAGG GGGCCGCAGC GGCAGCTAAT AAAAACAAAT CATCCAATCC GAGTGGTGCT GAAGATGCAG CCGCAGGTGC TGCCGCATCA CGTCGAAATC AGCCCACGGC TTCTGGAGCG GAAGGCGCTG CCGCTGGTGC GGCTGCTGCC AATAAAAATC AGCCGACAAT GTCCGGTGCC CAGGGAGCTG CTGTTGGCGC TACGGCAGCT AAAAACAATC AACCAGCCGT ATCCGGCGCA GCGGGCTATG CAGCTGTGAG GGATTCCTTC GATCATCCCA GCCTTTATAC ACCCGAATGG CATGGAGACA ATCAGGCGGC ATGGACAGCG TCGAACTGGC CAGCCAATGC CGCCTATACC AACGCCAGCC ACGCGGCAGT GGCAGCGCAC TGTGGCTACC AGACGAACGC TGCTGTCTCC TACGGATACG GCGACAACGT CAATTATGAA AACCAGATGG TTGTCGTGAA TGGCCAGGTG GCAGGGAGTG CTGCAGCATA CAGTCAGCAG GCAGCGCAAA TGGCCAACAA TGGACGAAAC GCGACGACAA CACCTGCTGA TGACTGGTTG CCGTTGGGCG TCTTCGCCCT GGTTCCTTCT GAAGACCAGC AGCCTCAGTT GACAGTGCAG CTGGCGATCA ACAAACAGGG AGTGTTACGA GGTAACTATA CAGAACTCGT TTCCGACCAC ACTCAGCTGA TTCATGGAAT GGTTGATCCA CAAACACAGC GGGCTGCATG GACTGTCGGT GATTCCGAGG GTTTCTATAT GGAAGCGGGC CTTAAGAATC TGACCGATGG TGATGCTCCC GTTCTCATTC ATCGACGTGG CAAGACCGAA CGCTGGGTGC TCGTCAGTTT GCCTCAACCG CAAAGTGCAG CAGCCAATTC CAACAATCCG GGAAATGGAA ACTAA
|
Protein sequence | MRHRATPLVM LLTLILAISS ASAEQRGRGG EGGGGDKSGG GRPGGSSSSA EKSGSKPPGG AWSSPSGKKP GTSQGDLPGN EDKKNPFNAN NPQGAAAAAN KNKSSNPSGA EDAAAGAAAS RRNQPTASGA EGAAAGAAAA NKNQPTMSGA QGAAVGATAA KNNQPAVSGA AGYAAVRDSF DHPSLYTPEW HGDNQAAWTA SNWPANAAYT NASHAAVAAH CGYQTNAAVS YGYGDNVNYE NQMVVVNGQV AGSAAAYSQQ AAQMANNGRN ATTTPADDWL PLGVFALVPS EDQQPQLTVQ LAINKQGVLR GNYTELVSDH TQLIHGMVDP QTQRAAWTVG DSEGFYMEAG LKNLTDGDAP VLIHRRGKTE RWVLVSLPQP QSAAANSNNP GNGN
|
| |